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diff test-data/blast xml example3.html @ 68:fa8a93bdefd7

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fix bug in calculations of alignment end
author Jan Kanis <jan.code@jankanis.nl>
date Wed, 18 Jun 2014 12:25:37 +0200
parents f611cf649c90
children 05500bdd7376
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--- a/test-data/blast xml example3.html	Tue Jun 17 18:07:02 2014 +0200
+++ b/test-data/blast xml example3.html	Wed Jun 18 12:25:37 2014 +0200
@@ -3321,9 +3321,12 @@
                     </tr>
                   </table>
 
-                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA  74
-                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||
-Subject   1516  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA  1589</pre>
+                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG  60
+                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | 
+Subject   1516  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC  1575</pre>
+                  <pre class=alignmentgraphic>Query       61  TTCGCAGTCCAGAA  74
+                ||||| ||||||||
+Subject   1576  TTCGCCGTCCAGAA  1589</pre>
                 </div>
 
               </div>
@@ -3509,9 +3512,12 @@
                     </tr>
                   </table>
 
-                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTGTTCGCAGTCCAGAA  74
-                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | ||||| ||||||||
-Subject   2319  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTCTTCGCCGTCCAGAA  2392</pre>
+                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG  60
+                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | 
+Subject   2319  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC  2378</pre>
+                  <pre class=alignmentgraphic>Query       61  TTCGCAGTCCAGAA  74
+                ||||| ||||||||
+Subject   2379  TTCGCCGTCCAGAA  2392</pre>
                 </div>
 
               </div>