view test-data/blast xml example3.html @ 85:2edb77030a9e py2.6

re-include backed out revisions and update version numbers
author Jan Kanis <jan.code@jankanis.nl>
date Tue, 24 Jun 2014 11:14:52 +0200
parents 05500bdd7376
children 8b3c5d334a84
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    <title>Blast output</title>
    
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  <body>
    
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                <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font>
                Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.
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    <div id=content>


      <section class=index>
        <h1>Queries</h1>

        <div class=indexentry><a href="#match1">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match2">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match3">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match4">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match5">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match6">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match7">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match8">
            Query_1: Forward_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match9">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match10">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match11">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match12">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match13">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match14">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match15">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match16">
            Query_2: Reverse_Primer|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match17">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match18">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match19">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match20">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match21">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match22">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match23">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match24">
            Query_3: Probe|NOST-Spec_(Genetic_ID)
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match25">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match26">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match27">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match28">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match29">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match30">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match31">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match32">
            Query_4: Forward_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (24 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match33">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match34">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match35">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match36">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match37">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match38">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match39">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match40">
            Query_5: Reverse_Primer|QL-ELE-Bt-F1(mod)/Bt-R
            (20 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match41">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match42">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match43">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match44">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match45">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match46">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match47">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match48">
            Query_6: Probe|QL-ELE-Bt-F1(mod)/Bt-R
            (25 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match49">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match50">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match51">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match52">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match53">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match54">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 0 hits)
        </a></div>
        <div class=indexentry><a href="#match55">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 1 hits)
        </a></div>
        <div class=indexentry><a href="#match56">
            Query_7: Amplicon|QL-ELE-Bt-F1(mod)/Bt-R
            (74 letters, 1 hits)
        </a></div>

      </section>

      
      <section class=match id=match1>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match2>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match3>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline3>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10%">
                        <div>2</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>4</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>10</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>14</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>20</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit3-1"
                   onmouseover='document.getElementById("defline3").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
                   onmouseout='document.getElementById("defline3").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit3-1"
                              title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
                              id="description3-1">
                        DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>7.011e-08</td>
                  <td>100%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit3-1>

                <div class=linkheader>
                  <div class=right><a href="#description3-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a>
                    <span class=b>Length:</span> 323
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot3-1-1>
                  <p class=range>
                    <span class=range>Range 1: 200 to 219</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign&amp;from=200&amp;to=219">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign&amp;from=200&amp;to=219">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>20/20(100%)</td>
                      <td>0/20(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  AGCGCGCAAACTAGGATAAA  20
                ||||||||||||||||||||
Subject    200  AGCGCGCAAACTAGGATAAA  219</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match4>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match5>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match6>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline6>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10%">
                        <div>2</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>4</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>10</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>14</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>20</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit6-1"
                   onmouseover='document.getElementById("defline6").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
                   onmouseout='document.getElementById("defline6").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit6-1"
                              title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
                              id="description6-1">
                        AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>7.011e-08</td>
                  <td>100%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit6-1>

                <div class=linkheader>
                  <div class=right><a href="#description6-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a>
                    <span class=b>Length:</span> 2457
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot6-1-1>
                  <p class=range>
                    <span class=range>Range 1: 2119 to 2138</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign&amp;from=2119&amp;to=2138">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign&amp;from=2119&amp;to=2138">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>20/20(100%)</td>
                      <td>0/20(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  AGCGCGCAAACTAGGATAAA  20
                ||||||||||||||||||||
Subject   2119  AGCGCGCAAACTAGGATAAA  2138</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match7>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match8>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match9>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match10>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match11>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match12>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match13>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match14>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match15>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match16>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match17>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match18>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline18>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10%">
                        <div>2</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>4</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>10</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>14</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>20</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit18-1"
                   onmouseover='document.getElementById("defline18").innerHTML="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3\u0027UTR/plant_junction_region.|-9105899556052450000"'
                   onmouseout='document.getElementById("defline18").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: transparent; width: 15%"></div>
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 85%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit18-1"
                              title="AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000"
                              id="description18-1">
                        AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000
                  </a></div></td>
                  <td>31.9</td>
                  <td>31.9</td>
                  <td>85%</td>
                  <td>2.981e-06</td>
                  <td>100%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit18-1>

                <div class=linkheader>
                  <div class=right><a href="#description18-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>AJ308515.1|GenBank|insert_GTS-40-3-2|Synthetic_construct_for_NOS_3&#39;UTR/plant_junction_region.|-9105899556052450000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Subject_2</a>
                    <span class=b>Length:</span> 1045
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot18-1-1>
                  <p class=range>
                    <span class=range>Range 1: 2 to 18</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign&amp;from=2&amp;to=18">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=graph&amp;log$=nuclalign&amp;from=2&amp;to=18">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>31.9 bits(34)</td>
                      <td>0.0</td>
                      <td>17/17(100%)</td>
                      <td>0/17(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        4  GCGCGGTGTCATCTATG  20
                |||||||||||||||||
Subject      2  GCGCGGTGTCATCTATG  18</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match19>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline19>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10%">
                        <div>2</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>4</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>10</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>14</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>20</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit19-1"
                   onmouseover='document.getElementById("defline19").innerHTML="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"'
                   onmouseout='document.getElementById("defline19").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit19-1"
                              title="DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000"
                              id="description19-1">
                        DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>7.011e-08</td>
                  <td>100%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit19-1>

                <div class=linkheader>
                  <div class=right><a href="#description19-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Subject_3</a>
                    <span class=b>Length:</span> 323
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot19-1-1>
                  <p class=range>
                    <span class=range>Range 1: 224 to 243</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign&amp;from=224&amp;to=243">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign&amp;from=224&amp;to=243">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>20/20(100%)</td>
                      <td>0/20(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  CGCGCGCGGTGTCATCTATG  20
                ||||||||||||||||||||
Subject    224  CGCGCGCGGTGTCATCTATG  243</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match20>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match21>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match22>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline22>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10%">
                        <div>2</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>4</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>10</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>14</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 10%">
                        <div>20</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit22-1"
                   onmouseover='document.getElementById("defline22").innerHTML="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"'
                   onmouseout='document.getElementById("defline22").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit22-1"
                              title="AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000"
                              id="description22-1">
                        AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>7.011e-08</td>
                  <td>100%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit22-1>

                <div class=linkheader>
                  <div class=right><a href="#description22-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Subject_6</a>
                    <span class=b>Length:</span> 2457
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot22-1-1>
                  <p class=range>
                    <span class=range>Range 1: 2143 to 2162</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign&amp;from=2143&amp;to=2162">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign&amp;from=2143&amp;to=2162">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>20/20(100%)</td>
                      <td>0/20(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  CGCGCGCGGTGTCATCTATG  20
                ||||||||||||||||||||
Subject   2143  CGCGCGCGGTGTCATCTATG  2162</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match23>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match24>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match25>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match26>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match27>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match28>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match29>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match30>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match31>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match32>
      
        <h1>Nucleotide Sequence (24 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match33>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match34>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match35>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match36>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match37>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match38>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match39>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match40>
      
        <h1>Nucleotide Sequence (20 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match41>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match42>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match43>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match44>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match45>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match46>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match47>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline47>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 12%">
                        <div>3</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>9</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>15</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>21</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>24</div>
                      </div>
                      <div class=graphicitem style="width: 4%">
                        <div>25</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit47-1"
                   onmouseover='document.getElementById("defline47").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
                   onmouseout='document.getElementById("defline47").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit47-1"
                              title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
                              id="description47-1">
                        AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>9.338e-08</td>
                  <td>92%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit47-1>

                <div class=linkheader>
                  <div class=right><a href="#description47-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a>
                    <span class=b>Length:</span> 4180
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot47-1-1>
                  <p class=range>
                    <span class=range>Range 1: 1541 to 1565</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign&amp;from=1541&amp;to=1565">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign&amp;from=1541&amp;to=1565">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>23/25(92%)</td>
                      <td>0/25(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  ACATGAACAGCGCCTTGACCACAGC  25
                |||||||||||||| ||||||| ||
Subject   1541  ACATGAACAGCGCCCTGACCACCGC  1565</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match48>
      
        <h1>Nucleotide Sequence (25 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline48>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 12%">
                        <div>3</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>6</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>9</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>12</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>15</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>18</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>21</div>
                      </div>
                      <div class=graphicitem style="width: 12%">
                        <div>24</div>
                      </div>
                      <div class=graphicitem style="width: 4%">
                        <div>25</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit48-1"
                   onmouseover='document.getElementById("defline48").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
                   onmouseout='document.getElementById("defline48").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: black; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit48-1"
                              title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
                              id="description48-1">
                        EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
                  </a></div></td>
                  <td>37.4</td>
                  <td>37.4</td>
                  <td>100%</td>
                  <td>9.338e-08</td>
                  <td>92%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit48-1>

                <div class=linkheader>
                  <div class=right><a href="#description48-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a>
                    <span class=b>Length:</span> 4983
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot48-1-1>
                  <p class=range>
                    <span class=range>Range 1: 2344 to 2368</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign&amp;from=2344&amp;to=2368">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign&amp;from=2344&amp;to=2368">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>37.4 bits(40)</td>
                      <td>0.0</td>
                      <td>23/25(92%)</td>
                      <td>0/25(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  ACATGAACAGCGCCTTGACCACAGC  25
                |||||||||||||| ||||||| ||
Subject   2344  ACATGAACAGCGCCCTGACCACCGC  2368</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match49>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match50>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match51>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match52>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match53>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match54>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>

        <section>
          <h2>No Hits</h2>
          <div class=grey>
            <table class=headerdata>
              <tr><td class=param>Message:</td><td>No hits found</td></tr>
            </table>
          </div>
        </section>
      </section>
      
      <section class=match id=match55>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline55>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>24</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>32</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>40</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>48</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>56</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>64</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>72</div>
                      </div>
                      <div class=graphicitem style="width: 2.7027027027%">
                        <div>&nbsp;</div>
                        <div class=lastlabel>74</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit55-1"
                   onmouseover='document.getElementById("defline55").innerHTML="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"'
                   onmouseout='document.getElementById("defline55").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: green; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit55-1"
                              title="AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000"
                              id="description55-1">
                        AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000
                  </a></div></td>
                  <td>89.7</td>
                  <td>89.7</td>
                  <td>100%</td>
                  <td>6.629e-23</td>
                  <td>86%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit55-1>

                <div class=linkheader>
                  <div class=right><a href="#description55-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Subject_7</a>
                    <span class=b>Length:</span> 4180
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot55-1-1>
                  <p class=range>
                    <span class=range>Range 1: 1516 to 1589</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign&amp;from=1516&amp;to=1589">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign&amp;from=1516&amp;to=1589">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>89.7 bits(98)</td>
                      <td>0.0</td>
                      <td>64/74(86%)</td>
                      <td>0/74(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG  60
                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | 
Subject   1516  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC  1575</pre>
                  <pre class=alignmentgraphic>Query       61  TTCGCAGTCCAGAA  74
                ||||| ||||||||
Subject   1576  TTCGCCGTCCAGAA  1589</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>
      
      <section class=match id=match56>
      
        <h1>Nucleotide Sequence (74 letters)</h1>

        <section class=header>

          <table class=headerdata>
            <tr><td class=param>Query ID:</td><td>Query_1</td></tr>
            <tr><td class=param>Query definition:</td><td>Forward_Primer|NOST-Spec_(Genetic_ID)</td></tr>
            <tr><td class=param>Query length:</td><td>20</td></tr>
            <tr><td class=param>Program:</td><td>BLASTN 2.2.29+</td></tr>
            <tr><td class=param>Database:</td><td></td></tr>
          </table>

        </section>


        <section class=graphics>
          <h2>Graphic Summary</h2>

          <div class=grey>
            <h3 class=centered>Distribution of 56 Blast Hits on the Query Sequence</h3>

            <div class=defline id=defline56>
              Mouse-over to show defline and scores, click to show alignments
            </div>

            <div class=graphic>
              <h4 class=darkHeader>Color key for alignment scores</h4>
              <div class=legend><div class=graphicrow>
                  <div class=graphicitem style="background-color: black">&lt;40</div>
                  <div class=graphicitem style="background-color: blue">40–50</div>
                  <div class=graphicitem style="background-color: green">50–80</div>
                  <div class=graphicitem style="background-color: magenta">80–200</div>
                  <div class=graphicitem style="background-color: red">200≤</div>
              </div></div>
              <div style="clear: left"></div>

              <div class=tablewrapper>

                <div class=scale>
                  <div>query:</div>
                  <div class=graphicrow>
                    <div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>8</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>16</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>24</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>32</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>40</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>48</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>56</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>64</div>
                      </div>
                      <div class=graphicitem style="width: 10.8108108108%">
                        <div>72</div>
                      </div>
                      <div class=graphicitem style="width: 2.7027027027%">
                        <div>&nbsp;</div>
                        <div class=lastlabel>74</div>
                      </div>
                    </div>
                  </div>
                  <div style="clear: left"></div>
                </div>

                <a class=matchresult
                   href="#hit56-1"
                   onmouseover='document.getElementById("defline56").innerHTML="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"'
                   onmouseout='document.getElementById("defline56").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
                   title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000">
                  <div class="matchrow graphicrow">
                    <div class="matchitem graphicitem"
                         style="background-color: green; width: 100%"></div>
                  </div>
                </a>

              </div>
            </div>
          </div>
        </section>



        <section class=descriptions>
          <h2>Descriptions</h2>

          <div class=grey><div class=white>
              <h4 class=darkHeader>Sequences producing significant alignments:</h4>

              <table class=descriptiontable>
                <col/><col/><col/><col/><col/><col/><col/>
                <tr>
                  <th>Description</th>
                  <th>Max score</th>
                  <th>Total score</th>
                  <th>Query cover</th>
                  <th>E value</th>
                  <th>Ident</th>
                  <th>Accession</th>
                </tr>
                <tr>
                  <td><div><a href="#hit56-1"
                              title="EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000"
                              id="description56-1">
                        EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000
                  </a></div></td>
                  <td>89.7</td>
                  <td>89.7</td>
                  <td>100%</td>
                  <td>6.629e-23</td>
                  <td>86%</td>
                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a></td>
                </tr>
              </table>

          </div></div>
        </section>



        <section class=alignments>
          <h2>Alignments</h2>

          <div class=grey><div class=white>
              <div class=alignment id=hit56-1>

                <div class=linkheader>
                  <div class=right><a href="#description56-1">Descriptions</a></div>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">GenBank</a>
                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign">Graphics</a>
                </div>

                <div class=title>
                  <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>
                  <p class=titleinfo>
                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Subject_8</a>
                    <span class=b>Length:</span> 4983
                    <span class=b>Number of Matches:</span> 1
                  </p>
                </div>


                <div class=hotspot id=hotspot56-1-1>
                  <p class=range>
                    <span class=range>Range 1: 2319 to 2392</span>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign&amp;from=2319&amp;to=2392">GenBank</a>
                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign&amp;from=2319&amp;to=2392">Graphics</a>
                  </p>

                  <table class=hotspotstable>
                    <tr>
                      <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
                    </tr>
                    <tr>
                      <td>89.7 bits(98)</td>
                      <td>0.0</td>
                      <td>64/74(86%)</td>
                      <td>0/74(0%)</td>
                      <td>Plus/Plus</td>
                    </tr>
                  </table>

                  <pre class=alignmentgraphic>Query        1  GAGGAAATGCGTATTCAATTCAACGACATGAACAGCGCCTTGACCACAGCTATCCCATTG  60
                ||||| ||||| || || ||||||||||||||||||||| ||||||| || |||||| | 
Subject   2319  GAGGAGATGCGCATCCAGTTCAACGACATGAACAGCGCCCTGACCACCGCCATCCCACTC  2378</pre>
                  <pre class=alignmentgraphic>Query       61  TTCGCAGTCCAGAA  74
                ||||| ||||||||
Subject   2379  TTCGCCGTCCAGAA  2392</pre>
                </div>

              </div>

          </div></div>
        </section>
      </section>

    </div>

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