Mercurial > repos > jasonk > package_metavelvet_sl_1_0
comparison tool_dependencies.xml @ 1:2cae8e69bad0 draft
Uploaded
| author | jasonk |
|---|---|
| date | Wed, 18 Jan 2017 00:59:51 -0500 |
| parents | 9749aa61e901 |
| children |
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| 0:9749aa61e901 | 1:2cae8e69bad0 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="metavelvet_sl" version="1.0"> | 3 <package name="velvet" version="1.2.10"> |
| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="download_by_url">http://metavelvet.dna.bio.keio.ac.jp/srcSL/MetaVelvetSLv1.0.tar.gz</action> | 6 <action type="download_by_url">https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz</action> |
| 7 <action type="shell_command">make MAXKMERLENGTH=128 CATEGORIES=3</action> | 7 <action type="shell_command">make</action> |
| 8 <action type="move_file"> | 8 <action type="move_file"> |
| 9 <source>meta-velvete</source> | 9 <source>velveth</source> |
| 10 <destination>$INSTALL_DIR</destination> | 10 <destination>$INSTALL_DIR</destination> |
| 11 </action> | 11 </action> |
| 12 <action type="move_file"> | 12 <action type="move_file"> |
| 13 <source>meta-velvetg</source> | 13 <source>velvetg</source> |
| 14 <destination>$INSTALL_DIR</destination> | 14 <destination>$INSTALL_DIR</destination> |
| 15 </action> | 15 </action> |
| 16 <action type="set_environment"> | 16 <action type="set_environment"> |
| 17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | 17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> |
| 18 </action> | 18 </action> |
| 19 </actions> | 19 </actions> |
| 20 </install> | 20 </install> |
| 21 </package> | 21 </package> |
| 22 </tool_dependency> | 22 </tool_dependency> |