diff tool_dependencies.xml @ 1:2cae8e69bad0 draft

Uploaded
author jasonk
date Wed, 18 Jan 2017 00:59:51 -0500
parents 9749aa61e901
children
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jan 17 07:00:59 2017 -0500
+++ b/tool_dependencies.xml	Wed Jan 18 00:59:51 2017 -0500
@@ -1,22 +1,22 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="metavelvet_sl" version="1.0">
-  <install version="1.0">
-      <actions>
-    <action type="download_by_url">http://metavelvet.dna.bio.keio.ac.jp/srcSL/MetaVelvetSLv1.0.tar.gz</action>
-    <action type="shell_command">make MAXKMERLENGTH=128 CATEGORIES=3</action>
-    <action type="move_file">
-                        <source>meta-velvete</source>
+    <package name="velvet" version="1.2.10">
+	<install version="1.0">
+	    <actions>
+		<action type="download_by_url">https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz</action>
+		<action type="shell_command">make</action>
+		<action type="move_file">
+                        <source>velveth</source>
                         <destination>$INSTALL_DIR</destination>
                 </action>
-    <action type="move_file">
-                        <source>meta-velvetg</source>
+		<action type="move_file">
+                        <source>velvetg</source>
                         <destination>$INSTALL_DIR</destination>
                 </action>
                 <action type="set_environment">
                         <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                 </action>
-      </actions>
+	    </actions>
          </install>
     </package>
 </tool_dependency>