annotate gaiac_time_sync/gaiac_time_sync.xml @ 0:d3418b0d9b27 draft

planemo upload for repository https://github.com/jaidevjoshi83/gaiac.git commit c29a769ed165f313a6410925be24f776652a9663-dirty

<tool id="gaiac_time_synchronization" name="GAIAC data synchronization" version="0.1.0" python_template_version="3.8">

	<description>Returns files with time synchronized data</description>

    <requirements>
      <requirement type="package" version="3.10">python</requirement>
       <requirement type="package" version="2.2.3">pandas</requirement>
       <requirement type="package" version="2.2.5">numpy</requirement>
    </requirements>

    <command detect_errors="exit_code"><![CDATA[
 
        python3 '$__tool_directory__/time_sync.py' -f '$input1' -t '$column' -o $out

    ]]></command>

    <inputs>
        <param type="data" name="input1" label="Input files" format="tabular" multiple="true" help="Input tabular data files"/>
        <param type="text" name="column" label="Date and Time Column"  help="Date and Time column name"/>
    </inputs>

    <outputs>
       <data name='out'  format='tabular' label="out.tsv" from_work_dir="out.tsv"/>
    </outputs>

    <tests>
    <test>
      <!-- Input files for time synchronization -->
      <param name="input1" value="input1.tsv,input2.tsv,input3.tsv"/>
      <param name="column" value="date_time"/>
      
      <!-- Output file to check synchronization -->
      <output name="out" file="out.tsv" />
    </test>
  </tests>

 <help><![CDATA[
.. class:: infomark

**What it does**

This tool synchronizes the data based on time from the different files.

   
-----

**Inputs**
    Time sychronization tool    
       * **--Input files** tabular data files (example input1.tsv, input2.tsv.... inputn.tsv ).
       
    
-----

**Outputs**
    * Returns time synchronized files.]]></help>


<citations>
  <citation type="bibtex">

    @article{dubey2022,
   title={AirPiuG-Galaxy software platform based open-source GUI tools for data collection and analysis from low cost air pollution sensors},
   author={Dubey, R and Joshi, J and Patra, A and Blankenberg, D},
   journal={GitHub repository},
   url = {https://github.com/ravishdubey/OPCN3API},
   year={2022},
   publisher={GitHub}
   } 

}</citation>
</citations>

</tool>