# HG changeset patch # User jay # Date 1641699385 0 # Node ID 908b9875d52fa93e94ef599d8db4e1e0bcf85648 # Parent 660b58f32b55cad38bf908b98d01c62819a9ce3d "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 32b9c48c81639a81be24bb3e2f48dc0a81c0deca" diff -r 660b58f32b55 -r 908b9875d52f PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py --- a/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 31 01:55:10 2021 +0000 +++ b/PDAUG_Peptide_Core_Functions/PDAUG_Peptide_Core_Functions.py Sun Jan 09 03:36:25 2022 +0000 @@ -16,12 +16,12 @@ filterduplicates = subparsers.add_parser('filterduplicates') filterduplicates.add_argument("-I","--InFile", required=True, default=None, help="Input file") filterduplicates.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +filterduplicates.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") keepnaturalaa = subparsers.add_parser('keepnaturalaa') keepnaturalaa.add_argument("-I","--InFile", required=True, default=None, help="Inputt file") keepnaturalaa.add_argument("-F","--FastOut", required=False, default='Out.fasta', help="Output file") - +keepnaturalaa.add_argument("-A","--FilterAA", required=True, default=None, help="Filter amino acide") filteraa = subparsers.add_parser('filteraa') filteraa.add_argument("-I","--InFile", required=True, default=None, help="Input file")