Mercurial > repos > jay > pdaug_peptide_core_functions
view PDAUG_Merge_Dataframes/PDAUG_Merge_Dataframes.py @ 3:c2600d4b08c3 draft
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit edb37634e419f75dd66292e712de51278746d883"
author | jay |
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date | Wed, 30 Dec 2020 03:04:00 +0000 |
parents | e743e76b8991 |
children | 3d57bd786f9a |
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import glob import pandas as pd import sys files = sys.argv[1] out_file = sys.argv[2] data_frame = pd.read_csv(files.split(',')[0],sep='\t') for file in files.split(',')[1:]: df1 = pd.read_csv(file,sep='\t') data_frame = pd.concat([data_frame,df1]) final_DF = data_frame.fillna(0) final_DF.to_csv(out_file,sep="\t", index=False)