Mercurial > repos > jay > pdaug_peptide_data_plotting
diff PDAUG_AddClassLabel/PDAUG_AddClassLabel.py @ 0:9e347250e3a1 draft
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit a9bd83f6a1afa6338cb6e4358b63ebff5bed155e"
author | jay |
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date | Wed, 28 Oct 2020 02:38:39 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/PDAUG_AddClassLabel/PDAUG_AddClassLabel.py Wed Oct 28 02:38:39 2020 +0000 @@ -0,0 +1,17 @@ +import pandas as pd +import argparse + +parser = argparse.ArgumentParser() + +parser.add_argument("-I", "--InFile", required=True, default=None, help="Input data file") +parser.add_argument("-C", "--ClassLabel", required=False, default=0, help="Class Label 0 or 1") +parser.add_argument("-t", "--ClassLabelTitle", required=False, default='Class_label', help="Title to use for class label column (Class_label)") +parser.add_argument("-O", "--OutFile", required=False, default='OutFile.tsv', help="Output file name") + +args = parser.parse_args() + +df1 = pd.read_csv(args.InFile, sep="\t") +df2 = pd.DataFrame([args.ClassLabel]*df1.shape[0], columns=[args.ClassLabelTitle]) + +df = pd.concat([df1, df2], axis=1) +df.to_csv(args.OutFile, sep="\t", index=False) \ No newline at end of file