Mercurial > repos > jay > pdaug_peptide_global_descriptors

annotate readme.md @ 7:bd711bbbd26e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 32b9c48c81639a81be24bb3e2f48dc0a81c0deca"
author jay
date Sun, 09 Jan 2022 04:51:05 +0000
parents 54799cf532c1
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
1 # PDAUG - a Galaxy based toolset for peptide library analysis, visualization, and machine learning modeling.
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
2
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
3 ### Overview
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
4
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
5 Peptide Design and Analysis Under Galaxy (PDAUG) package, a Galaxy based python powered collection of tools, workflows, and datasets for a rapid in-silico peptide library analysis. PDAUG offers tools for peptide library generation, data visualization, in-built and public database based peptide sequence retrieval, peptide feature calculation, and machine learning modeling. PDAUG tool suite can be downloaded and install through galaxy toolshed as a standard galaxy tool.
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
6
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
7
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
8 # Prebuild Docker Image
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
9
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
10 A prebuild build docker image based on the recent galaxy release can be obtained by the link below for a quick installation.
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
11
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
12  - [Docker Image](https://github.com/jaidevjoshi83/docker_pdaug)
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
13
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
14 # Contributors
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
15  - Jayadev Joshi
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
16
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
17  - Daniel Blankenberg
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
18
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
19 # History
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
20
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
21  - 0.1.0: First release!
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
22
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
23 # Support & Bug Reports
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
24
54799cf532c1 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
25 You can file an [github issue](https://github.com/jaidevjoshi83/docker_pdaug/issues).