Mercurial > repos > jay > pdaug_peptide_sequence_analysis

diff PDAUG_TSVtoFASTA/PDAUG_TSVtoFASTA.py @ 3:38f7df896a54 draft

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"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit edb37634e419f75dd66292e712de51278746d883"
author jay
date Wed, 30 Dec 2020 02:36:09 +0000
parents 79b1b090990b
children b73ba641e514
line wrap: on
line diff
--- a/PDAUG_TSVtoFASTA/PDAUG_TSVtoFASTA.py	Tue Dec 29 18:07:32 2020 +0000
+++ b/PDAUG_TSVtoFASTA/PDAUG_TSVtoFASTA.py	Wed Dec 30 02:36:09 2020 +0000
@@ -27,12 +27,12 @@
 
             if l[1] in line.split('\t')[1].strip('\n').strip('\r'):
                 n= n+1
-                of1.write('>peptide_'+str(n)+'_'+str(l[0])+'\n')
+                of1.write('>peptide_'+str(n)+'_'+str(l[1])+'\n')
                 of1.write(line.split('\t')[0]+'\n')
 
             if l[0] in line.split('\t')[1].strip('\n').strip('\r'):
                 m= m+1
-                of2.write('>peptide_'+str(m)+'_'+str(l[1])+'\n')
+                of2.write('>peptide_'+str(m)+'_'+str(l[0])+'\n')
                 of2.write(line.split('\t')[0]+'\n')
 
     elif Method == 'NoClassLabel':