diff PDAUG_Peptide_Ngrams/test-data/test1.fasta @ 0:e59674e3a391 draft

"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 6f53ad797ec1af02b41510063a86bec7d121abf3"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/PDAUG_Peptide_Ngrams/test-data/test1.fasta	Fri Nov 20 19:47:44 2020 +0000
@@ -0,0 +1,276 @@
+>ACP0
+GLWSKIKEVGKEAAKAAAKAAGKAALGAVSEAV
+>ACP2
+GLFDIIKKIAESI
+>ACP4
+GLLDIVKKVVGAFGSL
+>ACP6
+GLFDIVKKVVGALGSL
+>ACP8
+GLFDIVKKVVGTLAGL
+>ACP10
+GLFDIAKKVIGVIGSL
+>ACP12
+GLFDIVKKIAGHIAGSI
+>ACP14
+GLFDIVKKIAGHIVSSI
+>ACP16
+AACARFIDDFCDTLTPNIYRPRDNGQRCYAVNGHRCDFTVFNTNNGGNPIRASTPNCKTVLRTAANRCPTGGRGKINPNAPFLFAIDPNDGDCSTNF
+>ACP18
+HGVSGHGQHGVHG
+>ACP20
+FKCRRWQWRMKKLGAPSITCVRRAF
+>ACP22
+KWKLFKKIKFLHSAKKF
+>ACP24
+KSSAYSLQMGATAIKQVKKLFKKWGW
+>ACP26
+GIGTKILGGVKTALKGALKELASTYAN
+>ACP28
+GIGGKILSGLKTALKGAAKELASTYLH
+>ACP30
+GIGGVLLSAGKAALKGLAKVLAEKYAN
+>ACP32
+SIGAKILGGVKTFFKGALKELASTYLQ
+>ACP34
+FLPLLAGLAANFLPTIICKISYKC
+>ACP36
+FVQWFSKFLGRIL
+>ACP38
+KWKIFKKIEKVGRNIRNGIIKAGPAVAVLGEAKAL
+>ACP40
+GWLKKIGKKIERVGQHTRDATIQTIGVAQQAANVAATLK
+>ACP42
+KWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQIAK
+>ACP44
+SQLGDLGSGAGQGGGGGGSIRAAGGAFGKLEAAREEEFFYKKQKEQLERLKNDQIHQAEFHHQQIKEHEEAIQRHKDFLNNLHK
+>ACP46
+GIGKFLHSAKKFGKAFVGEIMNS
+>ACP48
+GIGAVLKVLTTGLPALISWIKRKRQQ
+>ACP50
+ALWKNMLKGIGKLAGQAALGAVKTLVGAE
+>ACP52
+ACYCRIPACIAGERRYGTCIYQGRLWAFCC
+>ACP54
+ECRRLCYKQRCVTYCRGR
+>ACP56
+LKLKSIVSWAKKVL
+>ACP58
+KWCFRVCYRGICYRRCR
+>ACP60
+KSCCRNTWARNCYNVCRLPGTISREICAKKCDCKIISGTTCPSDYPK
+>ACP62
+GLLSVLGSVAKHVLPHVVPVIAEHL
+>ACP64
+GLLSVLGSVVKHVIPHVVPVIAEHL
+>ACP66
+GLFKVLGSVAKHLLPHVAPVIAEK
+>ACP68
+GLFGVLGSIAKHVLPHVVPVIAEK
+>ACP70
+GLFVGVLAKVAAHVVPAIAEHF
+>ACP72
+GLFVGLAKVAAHNNPAIAEHFQA
+>ACP74
+GFVDFLKKVAGTIANVVT
+>ACP76
+GLLQTIKEKLESLESLAKGIVSGIQA
+>ACP78
+TRSSRAGLQFPVGRVHRLLRK
+>ACP80
+FFGWLIKGAIHAGKAIHGLIHRRRH
+>ACP82
+GLFDVIKKVASVIGGL
+>ACP84
+GLFDIIKKVASVVGGL
+>ACP86
+GRFKRFRKKFKKLFKKLSPVIPLLHLG
+>ACP88
+GGLRSLGRKILRAWKKYGPIIVPIIRIG
+>ACP90
+RRRPRPPYLPRPRPPPFFPPRLPPRIPPGFPPRFPPRFP
+>ACP92
+GLLGPLLKIAAKVGSNLL
+>ACP94
+GLICESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKEKTGLI
+>ACP96
+DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK
+>ACP98
+FFHHIFRGIVHVGKTIHRLVTG
+>ACP100
+KLAKLAKKLAKLAK
+>ACP102
+KTCENLADTFRGPCFATSNC
+>ACP104
+IDWKKLLDAAKQIL
+>ACP106
+FLIGMTQGLICLITRKC
+>ACP108
+ILPILSLIGGLLGK
+>ACP110
+GLLGLLGSVVSHVVPAIVGHF
+>ACP112
+GLLGLLGSVVSHVLPAITQHL
+>ACP114
+GIKCRFCCGCCTPGICGVCCRF
+>ACP116
+QSHLSLCRWCCNCCRSNKGC
+>ACP118
+ILGPVISTIGGVLGGLLKNL
+>ACP120
+FLPILASLAAKFGPKLFCLVTKKC
+>ACP122
+GLWSKIKEAAKAAGKAALNAVTGLVNQGDQPS
+>ACP124
+LLGMIPLAISAISALSKL
+>ACP126
+GLPVCGETCVGGTCNTPGCSCSWPVCTRN
+>ACP128
+GVPICGETCTLGTCYTAGCSCSWPVCTRN
+>ACP130
+GIPCGESCVWIPCISSAIGCSCKSKVCYRN
+>ACP132
+GIPCAESCVWIPCTVTALIGCGCSNKVCYN
+>ACP134
+GTFPCGESCVFIPCLTSAIGCSCKSKVCYKN
+>ACP136
+GLLPCAESCVYIPCLTTVIGCSCKSKVCYKN
+>ACP138
+GRDYRTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVTQGLVAGETAQQICEDLRLCIPSTGPL
+>ACP140
+GETDPNTQLLNDLGNNMAWGAALGAPGGLGSAALGAAGGALQTVGQGLIDHGPVNVFIPVLIGPSWNGSGSGYNSATSSSGSGS
+>ACP142
+GFKDLLKGAAKALVKTVLF
+>ACP144
+KSCCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPK
+>ACP146
+KSCCPNTTGRNIYNTCRFGGGSREVCARISGCKIISASTCPSDYPK
+>ACP148
+KSCCPNTTGRNIYNTCRLTGSSRETCAKLSGCKIISASTCPSNYPK
+>ACP150
+MRKEFHNVLSSGQLLADKRPARDYNRK
+>ACP152
+KSCCKNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYPK
+>ACP154
+FIFHIIKGLFHAGKMIHGLVTRRRH
+>ACP156
+FLPAIVGAAAKFLPKIFCAISKKC
+>ACP158
+FLPIIAGVAAKVLPKIFCAISKKC
+>ACP160
+FLPIIAGIAAKFLPKIFCTISKKC
+>ACP162
+FLPVIAGVAANFLPKLFCAISKKC
+>ACP164
+FLPIIAGAAAKVVQKIFCAISKKC
+>ACP166
+GLMDTIKGVAKTVAASWLDKLKCKITGC
+>ACP168
+VNWKKVLGKIIKVAK
+>ACP170
+VNWKKILGKIIKVAK
+>ACP172
+FFSLLPSLIGGLVSAIK
+>ACP174
+RFRLPFRRPPIRIHPPPFYPPFRRFL
+>ACP176
+KWKLFKKIPKFLHLAKKF
+>ACP178
+YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG
+>ACP180
+GIPCGESCVFIPCITGAIGCSCKSKVCYRN
+>ACP182
+GEFLKCGESCVQGECYTPGCSCDWPICKKN
+>ACP184
+GLPTCGETCTLGTCYVPDCSCSWPICMKN
+>ACP186
+GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
+>ACP188
+FVDLKKIANIINSIFGK
+>ACP190
+GSIPCGESCVFIPCISSVIGCACKSKVCYKN
+>ACP192
+GIPCGESCVFIPCISSVIGCSCSSKVCYRN
+>ACP194
+GSIPCGESCVFIPCISAVIGCSCSNKVCYKN
+>ACP196
+GSIPCEGSCVFIPCISAIIGCSCSNKVCYKN
+>ACP198
+GIPCGESCVFIPCLTSAIDCSCKSKVCYRN
+>ACP200
+GMWSKILGHLIR
+>ACP202
+GKWMSLLKHILK
+>ACP204
+GFGMALKLLKKVL
+>ACP206
+GTGLPMSERRKIMLMMR
+>ACP208
+GIACGESCVFLGCFIPGCSCKSKVCYFN
+>ACP210
+GVIPCGESCVFIPCISSVLGCSCKNKVCYRD
+>ACP212
+KLCGETCFKFKCYTPGCSCSYPFCK
+>ACP214
+GDACGETCFTGICFTAGCSCNPWPTCTRN
+>ACP216
+GIPCAESCVWIPPCTITALMGCSCKNNVCYNN
+>ACP218
+IPCGESCVWIPCITAIAGCSCKNKVCYT
+>ACP220
+AIPCGESCVWIPCISTVIGCSCSNKVCYR
+>ACP222
+GEYCGESCYLIPCFTPGCYCVSRQCVNKN
+>ACP224
+IPCGESCVWIPCISGMFGCSCKDKVCYS
+>ACP226
+FLGWLFKWASK
+>ACP228
+FLKWLFKWAKK
+>ACP230
+KWKSFLKTFKSAKKTVLHTALKAISS
+>ACP232
+KWKSFLKTFKSLKKTVLHTLLKAISS
+>ACP234
+MPFLFCNVNDVCNFASRNDYSCNYYSNSYSFWLASLNPER
+>ACP236
+KWKLFKKIGAVLKVL
+>ACP238
+GACFSIAHECGA
+>ACP240
+TCCATGACGTTCCTGACGTT
+>ACP242
+KRFKQDGGASHASPASS
+>ACP244
+KRAKAAGGWSHWSPWSSC
+>ACP246
+LLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTES
+>ACP248
+FLGALFKVASKVLPSVKCAITKKC
+>ACP250
+GIGKFLKKAKKFGKAFVKILKK
+>ACP252
+GIGKFLKKAKKGIGAVLKVLTTGL
+>ACP254
+VECYGPNRPQF
+>ACP256
+KRFKQDGGWSHWSPWSSC
+>ACP258
+RQVFQVAYIIIKA
+>ACP260
+KAFDITYVRLKF
+>ACP262
+DFKLFAVTIKYR
+>ACP264
+DFKLFAVYIKYR
+>ACP266
+WHSDMEWWYLLG
+>ACP268
+HTMYYHHYQHHL
+>ACP270
+RLVSYNGIIFFLK
+>ACP272
+GRENYHGCTTHWGFTLC
+>ACP274
+ASSSYPLIHWRPWAR