diff PDAUG_Peptide_Ngrams/test-data/test2.fasta @ 0:e59674e3a391 draft

"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 6f53ad797ec1af02b41510063a86bec7d121abf3"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/PDAUG_Peptide_Ngrams/test-data/test2.fasta	Fri Nov 20 19:47:44 2020 +0000
@@ -0,0 +1,276 @@
+>non-ACP0
+MTISLIWGIAMVVCCCIWVIFDRRRRKAGEPPL
+>non-ACP2
+MFATPLRQPTNASGARPAVSMDGQETPFQYEITD
+>non-ACP4
+LLWRKVAGATVGPGPVPA
+>non-ACP6
+DSPDPMNGASSNALIAKMNSAKLLYQHY
+>non-ACP8
+NNQEVIDAISQAISQTPGCVL
+>non-ACP10
+KKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEG
+>non-ACP12
+CSRLLPSLAQEEG
+>non-ACP14
+KNDFAALQAKLDADAAEIEKWWSDSR
+>non-ACP16
+VDREQLVQKARLAEQAERYDD
+>non-ACP18
+RPLRRVVLFYQGKLCSMAGNFWQSSHYLQW
+>non-ACP20
+GAAGERKLCLLSLLLIGA
+>non-ACP22
+MFRKLLKMWILLRPTHWLILIALCAVTCAGYWLLWSE
+>non-ACP24
+HLRGPADSGWMPQAAPCLSGAPQAS
+>non-ACP26
+NNPNNSNSHLRPHAYNNSRRDDSD
+>non-ACP28
+VVILASLSVMFLVSLWQQKIRERLPPGPTPLPFIGNY
+>non-ACP30
+ICLSCLISFFLWNQNRAKGKLPPG
+>non-ACP32
+VVMNSLRVILQAS
+>non-ACP34
+ARPRLDLQLVQRFVRIQKVF
+>non-ACP36
+MLAKGLSLRSVLAKGCQPFLSPTWQSSVLATGGGANIS
+>non-ACP38
+AAGLPGAALPLRKRPLRAPSPEPAAPRGAAGLVV
+>non-ACP40
+PPMPSAPPVHPPP
+>non-ACP42
+SCPIDKRRPLIAFLRRLRD
+>non-ACP44
+RLGLWASGLILILGFLKLLRLLLRRQRLARAMD
+>non-ACP46
+FSPQRDRFQAEGS
+>non-ACP48
+GTLWALVFLGILVGMVVPSPAGTRANNTLLDSRG
+>non-ACP50
+MNRLLQKGTSLVPSWRTR
+>non-ACP52
+MTTSLIWGIAIAACCCLWLILGIRRRQT
+>non-ACP54
+ATLANGMSLQPPLEEVS
+>non-ACP56
+PLTATNSGLAVNN
+>non-ACP58
+VRACHKVCRCLLSGFGGRVDAGQPELLTER
+>non-ACP60
+TAGILLLLLLGTLEGS
+>non-ACP62
+MEPSILLLLALLVGFLLLLVRGH
+>non-ACP64
+MKNCFQLLCNLKVPAAGFKNTVKS
+>non-ACP66
+SVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSK
+>non-ACP68
+KPLGLLKPSSLMKVSGRFKAHQDA
+>non-ACP70
+ARTLNNKLSLSKPKFSGFT
+>non-ACP72
+LLLVIIWTLFGPSGLGEELLSLSLASLLPAPASPGPP
+>non-ACP74
+WPGILVGGARVASCRYPALGPRLA
+>non-ACP76
+RSVKGLVALITGGASGL
+>non-ACP78
+AAAALRARILQVSSKVN
+>non-ACP80
+TGCCIAGRLANLDDQNLTVAL
+>non-ACP82
+GSILGFLQIATVLTVLLLLLK
+>non-ACP84
+AARQIGSCLMRCRTLDTTSP
+>non-ACP86
+WGCRGRRWAFARVDGGSCHRRGAPTGSTSNQIR
+>non-ACP88
+YAKPGAVRSPAQILQWQVLPNTVPAKS
+>non-ACP90
+RMAGPWLSLHEARLLGTRGAAAPKAV
+>non-ACP92
+SISNRAAVPEHGVAPDAERL
+>non-ACP94
+PNFSMETWLLLV
+>non-ACP96
+PRPPSKTYRGAFQN
+>non-ACP98
+SVLVKGCQPFLSAPRECPGHPRVGT
+>non-ACP100
+LVTPPKALLKPLSIPNQ
+>non-ACP102
+KMQGSRMDEQRCS
+>non-ACP104
+VIADDLPPTCIRP
+>non-ACP106
+LPGGLRVLVQTGH
+>non-ACP108
+GWIWRWGWGRRCLGRPGLPGPGPGPATPLFLLLL
+>non-ACP110
+RGIRGSSAARPSGRRRDPAGRTTETGFNIFTQHD
+>non-ACP112
+QQEKEFLESYPQNCPPDALPGTPGNLD
+>non-ACP114
+APARRVLQVKRVMQESSLSPAHL
+>non-ACP116
+KVAPGGPTGYPGNLTAEQEQKLGELKMILL
+>non-ACP118
+FLASYPQKCPAGSLPGTPGNTDE
+>non-ACP120
+MDAKARNCLLQHREALEKDIKTSY
+>non-ACP122
+ASRQLLVAPPEAL
+>non-ACP124
+MISNGIGTVTTGKRSMCLFPLLLIGLWGC
+>non-ACP126
+MTLRNFGMGKRSIEDRVQEEARCLVEELRKTNASPC
+>non-ACP128
+AVFGLGGVGLSVIMGCKAAGASRIIAVDIN
+>non-ACP130
+PNAKQSILQKNPDDVVIVAAYRTA
+>non-ACP132
+AMELLLTATIFYLVLWVVKAFRLQVPKGLKSPPGP
+>non-ACP134
+LLAAGFCPAVLCH
+>non-ACP136
+AASVNDEQHQRIIKYGRALVLDIVEQ
+>non-ACP138
+IARLREDGIQKRVIQEGRGELPDFQDG
+>non-ACP140
+FIVVMNILALTLPFLAAEVQN
+>non-ACP142
+CQNGRRANRTVRFARTA
+>non-ACP144
+WVTVRSQQRGLFPAI
+>non-ACP146
+LLRSCPLQGSPGRPRSV
+>non-ACP148
+LNDGHFMPVLGFGTYAPPEVPRNRAVEV
+>non-ACP150
+HLGRPSAPTIVAQPVSGLASPASFQPEQFQYTLDNNVLT
+>non-ACP152
+RPEPGGCCCRRTVRANGC
+>non-ACP154
+SWVEENRASFQPPVCNKLMHR
+>non-ACP156
+VFHRVRWAPELGASLG
+>non-ACP158
+RAKVLTLDGMNPRVRRVEYAVRGPIVQRALELEQELRQ
+>non-ACP160
+LLQRARLAEQAERYDDMASAMKAVTELNEPLS
+>non-ACP162
+ALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRA
+>non-ACP164
+AALPMLWTGLVLLGLLGFPQTPAQGHDTVQPNFQQ
+>non-ACP166
+QRRQNDSSVFLAIMVAAAVES
+>non-ACP168
+CNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDS
+>non-ACP170
+LVLLTVQNSALILTLNYSRIMPGYD
+>non-ACP172
+TVLSPPQRFKRILQAMMLAVAVV
+>non-ACP174
+ISRGLLLLAALCCLAPSFL
+>non-ACP176
+VAGTESAQGPPGPAASLELWLNKATDPS
+>non-ACP178
+QYLRIRTVQPEPDYGAAV
+>non-ACP180
+ASPTQTPPTTSTIRVARRSRVALVAM
+>non-ACP182
+TIWRNQHTYKMATSASANLSKIVKKNYMELPQDGKVQ
+>non-ACP184
+LSITRGLLLLAALCCLAPIS
+>non-ACP186
+ILLSIWRQSSGRGKLPPGPIPLPIIGNIFQ
+>non-ACP188
+LLLLSWVALGPRSLEGADPGTPGEAEGPACP
+>non-ACP190
+LRVKRAMQEASFMPPLLPPAAHQRFSTVPAVP
+>non-ACP192
+GLLLLAGLCCLVFGIMAEDAQVAQGPSQQI
+>non-ACP194
+RHVGLLCATGPQRWRF
+>non-ACP196
+AAVALARPKPPLRHQEHLQNEPDS
+>non-ACP198
+SRVNDQSQASRNGLKGKVLTLDTMNPCV
+>non-ACP200
+AAALGPGVLQATRAFHTGQPRLAPLPPLPEYGGK
+>non-ACP202
+LCTSGLWTAQASTNESSNSHRGLAPTNV
+>non-ACP204
+PAIQPVLSGLSRIVNGEEA
+>non-ACP206
+GCQASLSTAQERLGHPGVPTREGVR
+>non-ACP208
+RKVLILTLVVAACGFVLWSSNGR
+>non-ACP210
+GRVRSRCPGPALLLLLALAARPALAGPPAAALQ
+>non-ACP212
+CRITKPALLVLNQETAKVVQT
+>non-ACP214
+KAEVCMAVPWLSLQ
+>non-ACP216
+SHLELNNGTKMPTLGLGT
+>non-ACP218
+LLLPEAAAERDAREKLALWDRRPDTTAPL
+>non-ACP220
+LLALSLVLLYRYATYSHGFFKKLGIPGPKPLPLFGNVLS
+>non-ACP222
+LLSLWRQSSGRGKLPPGPTPLPVIGNILQIGIKD
+>non-ACP224
+AFKSMEVANFYYEADCLAAAYGGKAAPAAPPADRPGPR
+>non-ACP226
+SLFWAARPLQRCGQLVRMAIRAQH
+>non-ACP228
+MRPPRTLTSTATMSALSTSMPMEIDDVMDEDAVNGQA
+>non-ACP230
+LLSLIGFCWAQYDP
+>non-ACP232
+LWARSKNDQLRISFPPGLCWG
+>non-ACP234
+PQGFDVDRDAKKLNKACKGMGTNEAAIIEILSG
+>non-ACP236
+IFCLILWVVKAWQPRLPKGLKSPPGPWGWPLLG
+>non-ACP238
+LDAASPGPLALLGLLFAATLLLSALFLL
+>non-ACP240
+VTLLFKLYCLA
+>non-ACP242
+ATRAAAARLVGTAASRTPAAARH
+>non-ACP244
+RNKLDLETLTDILEHQIR
+>non-ACP246
+RRLVLQARTYAQAAASPAPAAGPGQMSFTFASPTQVFF
+>non-ACP248
+PGRSRSAADDINPAPANM
+>non-ACP250
+LLSALTLETWVLLAVILVLLYRLG
+>non-ACP252
+VMGHGLCPQGARAKAAIPAALRDHEST
+>non-ACP254
+FLVSIAGLLYALVQLGQPCDCLPPLRAAA
+>non-ACP256
+VRSVRAAVGGLRAISAPSAPCLPRPWGLRAG
+>non-ACP258
+RGGCWPRGLQQLLVPGG
+>non-ACP260
+APATPPRPLKRKKLQFTDVTPESSP
+>non-ACP262
+EQAERYDDMAAAMKAVTEQGHELSNEERNL
+>non-ACP264
+MPNDPSDNQLK
+>non-ACP266
+TELLLAITVFCLGFWVVRALRTQVP
+>non-ACP268
+LTADLLGAPFFTLPKELQLALLERQTVFL
+>non-ACP270
+GHGRLVEIQGRLGVRIER
+>non-ACP272
+LPFKLLLFVLLDGWTRLTH
+>non-ACP274
+QALWLVLVLSMPPVLVAAVVGTLVSLVQ