Mercurial > repos > jay > pdaug_peptide_structure_builder

annotate readme.md @ 3:2b05b50ca410 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit edb37634e419f75dd66292e712de51278746d883"
author jay
date Wed, 30 Dec 2020 03:01:05 +0000
parents 39a014261f29
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
1 # PDAUG - a Galaxy based toolset for peptide library analysis, visualization, and machine learning modeling.
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
2
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
3 ### Overview
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
4
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
5 Peptide Design and Analysis Under Galaxy (PDAUG) package, a Galaxy based python powered collection of tools, workflows, and datasets for a rapid in-silico peptide library analysis. PDAUG offers tools for peptide library generation, data visualization, in-built and public database based peptide sequence retrieval, peptide feature calculation, and machine learning modeling. PDAUG tool suite can be downloaded and install through galaxy toolshed as a standard galaxy tool.
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
6
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
7
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
8 # Prebuild Docker Image
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
9
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
10 A prebuild build docker image based on the recent galaxy release can be obtained by the link below for a quick installation.
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
11
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
12  - [Docker Image](https://github.com/jaidevjoshi83/docker_pdaug)
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
13
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
14 # Contributors
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
15  - Jayadev Joshi
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
16
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
17  - Daniel Blankenberg
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
18
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
19 # History
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
20
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
21  - 0.1.0: First release!
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
22
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
23 # Support & Bug Reports
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
24
39a014261f29 "planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 3c91f421d26c8f42cf2671e47db735d2cf69dde8"
jay
parents:
diff changeset
25 You can file an [github issue](https://github.com/jaidevjoshi83/docker_pdaug/issues).