Mercurial > repos > jay > pdaug_tsvtofasta
view PDAUG_AddClassLabel/PDAUG_AddClassLabel.py @ 1:e272809a193f draft
"planemo upload for repository https://github.com/jaidevjoshi83/pdaug commit 7c8b5eaa83716d354a01fa1488427f110fe68692"
author | jay |
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date | Wed, 18 Nov 2020 14:41:52 +0000 |
parents | c3f0b3a6339e |
children |
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import pandas as pd import argparse parser = argparse.ArgumentParser() parser.add_argument("-I", "--InFile", required=True, default=None, help="Input data file") parser.add_argument("-C", "--ClassLabel", required=False, default=0, help="Class Label 0 or 1") parser.add_argument("-t", "--ClassLabelTitle", required=False, default='Class_label', help="Title to use for class label column (Class_label)") parser.add_argument("-O", "--OutFile", required=False, default='OutFile.tsv', help="Output file name") args = parser.parse_args() df1 = pd.read_csv(args.InFile, sep="\t") df2 = pd.DataFrame([args.ClassLabel]*df1.shape[0], columns=[args.ClassLabelTitle]) df = pd.concat([df1, df2], axis=1) df.to_csv(args.OutFile, sep="\t", index=False)