comparison blosum4galaxy/Blosum.xml @ 1:b2469e2b37be draft

Uploaded

0:18232eedb89c

<tool id="blosum" name="Blosum" version="0.6.0">
    <description>Scores for peptide alignment by sequence</description>
    <requirements>
       <requirement type="package">openjdk</requirement>
    </requirements>
    <command detect_errors="aggressive"><![CDATA[        
        java -Djava.awt.headless=true -jar '$__tool_directory__/blosum2.jar'
    ]]></command>
    <inputs>
        <param format="csv" name="input.csv" type="data" label="Peptide Sequences"/>
    </inputs>      
    <outputs>
        <data format="csv" name="output.csv" from_work_dir="output.csv" label="peptides with scores.csv"/>
    </outputs>
    <tests>
        <test>
        </test>
    </tests>

1:b2469e2b37be

<tool id="blosum" name="Blosum" version="0.6.0">
    <description>Scores peptides for their terbium binding capability</description>
    <requirements>
       <requirement type="package">openjdk</requirement>
    </requirements>
    <command detect_errors="aggressive"><![CDATA[        
        java -Djava.awt.headless=true -jar '$__tool_directory__/blosum2.jar'
    ]]></command>
    <inputs>
        <param format="csv" name="INPUT.csv" type="data" label="Peptide Sequences"/>
    </inputs>      
    <outputs>
        <data format="csv" name="output.csv" from_work_dir="BlosumOutput.csv" label="peptides with scores.csv"/>
    </outputs>
    <tests>
        <test>
        </test>
    </tests>