# HG changeset patch # User jfb # Date 1547492115 18000 # Node ID 203c72c1c2ea21edeb063cda6be86524155dc6a3 # Parent 31f6858163bd69ab02a9b412327eefa0025d7a5d Uploaded diff -r 31f6858163bd -r 203c72c1c2ea KT-ID fisher test/7-7-fisher-galaxy_working.R --- a/KT-ID fisher test/7-7-fisher-galaxy_working.R Mon Jan 14 13:33:18 2019 -0500 +++ b/KT-ID fisher test/7-7-fisher-galaxy_working.R Mon Jan 14 13:55:15 2019 -0500 @@ -3,8 +3,9 @@ PositiveSubstrateList<- read.csv("substrates.csv", stringsAsFactors=FALSE) NegativeSubstrateList<- read.csv("negatives.csv", stringsAsFactors=FALSE) -SubstrateBackgroundFrequency<- read.csv("SBF.csv", stringsAsFactors=FALSE) +SubstrateBackgroundFrequency<- read.csv("SBF.csv", stringsAsFactors=FALSE,header = FALSE) SubstrateBackgroundFrequency<-t(SubstrateBackgroundFrequency) +SubstrateBackgroundFrequency<-SubstrateBackgroundFrequency[2:nrow(SubstrateBackgroundFrequency),] ScreenerFilename<-"screener" screaner<-read.csv(ScreenerFilename, header = FALSE, stringsAsFactors = FALSE)