annotate plasmidfinder/sequences.nsd @ 3:e6027598a35c draft

planemo upload

lcl|plasmidfinder~~~col(bs512)_1__nc_010656_dupe~~~1
lcl|plasmidfinder~~~col(bs512)_1~~~nc_0106560
lcl|plasmidfinder~~~col(imgs31)_1~~~nc_0114062
lcl|plasmidfinder~~~col(irgk)_1~~~ay5430713
lcl|plasmidfinder~~~col(kphs6)_1~~~nc_0168414
lcl|plasmidfinder~~~col(mg828)_1~~~nc_0084865
lcl|plasmidfinder~~~col(mgd2)_1~~~nc_0037896
lcl|plasmidfinder~~~col(mp18)_1~~~nc_0136527
lcl|plasmidfinder~~~col(pwes)_1~~~dq26876413
lcl|plasmidfinder~~~col(sd853)_1~~~nc_0153928
lcl|plasmidfinder~~~col(vcm04)_1~~~hm2311659
lcl|plasmidfinder~~~col(yc)_1~~~nc_00214410
lcl|plasmidfinder~~~col(ye4449)_1~~~fj69640512
lcl|plasmidfinder~~~col(yf27601)_1~~~jf93765511
lcl|plasmidfinder~~~col156_1~~~nc_00978114
lcl|plasmidfinder~~~col3m_1~~~jx51406515
lcl|plasmidfinder~~~col8282_1~~~dq99535316
lcl|plasmidfinder~~~cole10_1~~~x0165417
lcl|plasmidfinder~~~colkp3_1~~~jn20580018
lcl|plasmidfinder~~~colpvc_1~~~jx13308820
lcl|plasmidfinder~~~colrnai_1~~~dq29801919
lcl|plasmidfinder~~~inca/c2_1~~~jn15780421
lcl|plasmidfinder~~~inca/c_1~~~fj70580722
lcl|plasmidfinder~~~incb/o/k/z_1~~~cu92814723
lcl|plasmidfinder~~~incb/o/k/z_2~~~gu25664124
lcl|plasmidfinder~~~incb/o/k/z_3~~~gq25988825
lcl|plasmidfinder~~~incb/o/k/z_4~~~fn86883226
lcl|plasmidfinder~~~incfia(hi1)_1_hi1~~~af25087827
lcl|plasmidfinder~~~incfia_1~~~ap00191828
lcl|plasmidfinder~~~incfib(ap001918)_1~~~ap00191829
lcl|plasmidfinder~~~incfib(k)_1_kpn3~~~jn23370430
lcl|plasmidfinder~~~incfib(mar)_1_pndm-mar~~~jn42033631
lcl|plasmidfinder~~~incfib(pb171)_1_pb171~~~ab02494633
lcl|plasmidfinder~~~incfib(pctu1)_1_pctu1~~~fn54309434
lcl|plasmidfinder~~~incfib(pctu3)_1_pctu3~~~fn54309635
lcl|plasmidfinder~~~incfib(pecla)_1_pecla~~~cp00191936
lcl|plasmidfinder~~~incfib(pentas01)_1_pentas01~~~cp00302737
lcl|plasmidfinder~~~incfib(pente01)_1_pente01~~~cp00065438
lcl|plasmidfinder~~~incfib(phcm2)_1_phcm2~~~al51338439
lcl|plasmidfinder~~~incfib(pkphs1)_1_pkphs1~~~cp00322340
lcl|plasmidfinder~~~incfib(plf82)_1_plf82~~~cu63887241
lcl|plasmidfinder~~~incfib(pqil)_1_pqil~~~jn23370542
lcl|plasmidfinder~~~incfib(s)_1~~~fn43203132
lcl|plasmidfinder~~~incfic(fii)_1~~~ap00191843
lcl|plasmidfinder~~~incfii(29)_1_puti89~~~cp00303544
lcl|plasmidfinder~~~incfii(k)_1~~~cp00064845
lcl|plasmidfinder~~~incfii(p14)_1_p14~~~jq41853851
lcl|plasmidfinder~~~incfii(p96a)_1_p96a~~~jq41852152
lcl|plasmidfinder~~~incfii(pcoo)_1_pcoo~~~cr94228555
lcl|plasmidfinder~~~incfii(pcry)_1_pcry~~~nc_00581453
lcl|plasmidfinder~~~incfii(pctu2)_1_pctu2~~~fn54309554
lcl|plasmidfinder~~~incfii(pecla)_1_pecla~~~cp00191956
lcl|plasmidfinder~~~incfii(penta)_1_penta~~~cp00302757
lcl|plasmidfinder~~~incfii(phn7a8)_1_phn7a8~~~jn23251758
lcl|plasmidfinder~~~incfii(pkpx1)~~~ap01205559
lcl|plasmidfinder~~~incfii(pmet)_1_pmet1~~~eu38301660
lcl|plasmidfinder~~~incfii(prsb107)_1_prsb107~~~aj85108961
lcl|plasmidfinder~~~incfii(pse11)_1_pse11~~~ap00924262
lcl|plasmidfinder~~~incfii(pseudo)_1_pseudo~~~nc_01175964
lcl|plasmidfinder~~~incfii(pyva12790)_1_pyva12790~~~ay15084363
lcl|plasmidfinder~~~incfii(s)_1~~~cp00085846
lcl|plasmidfinder~~~incfii(sarc14)_1_sarc14~~~jq41854047
lcl|plasmidfinder~~~incfii(serratia)_1_serratia~~~nc_00982948
lcl|plasmidfinder~~~incfii(y)_1_ps~~~cp00104949
lcl|plasmidfinder~~~incfii(yp)_1_yersenia~~~cp00067050
lcl|plasmidfinder~~~incfii_1_pkp91~~~cp00096666
lcl|plasmidfinder~~~incfii_1_psfo~~~af40129267
lcl|plasmidfinder~~~incfii_1~~~ay45801665
lcl|plasmidfinder~~~inchi1a(cit)_1_pndm-cit~~~jx18297568
lcl|plasmidfinder~~~inchi1a_1~~~af25087869
lcl|plasmidfinder~~~inchi1b(cit)_1_pndm-cit~~~jx18297570
lcl|plasmidfinder~~~inchi1b(r27)_1_r27~~~af25087871
lcl|plasmidfinder~~~inchi1b_1_pndm-mar~~~jn42033672
lcl|plasmidfinder~~~inchi2_1~~~bx66401574
lcl|plasmidfinder~~~inchi2a_1~~~bx66401573
lcl|plasmidfinder~~~inci1_1_alpha~~~ap00514775
lcl|plasmidfinder~~~inci2_1_delta~~~ap00252777
lcl|plasmidfinder~~~inci2_1~~~kp34712776
lcl|plasmidfinder~~~incl/m(pmu407)_1_pmu407~~~u2734578
lcl|plasmidfinder~~~incl/m(poxa-48)_1_poxa-48~~~jn62628679
lcl|plasmidfinder~~~incl/m_1~~~af55041580
lcl|plasmidfinder~~~incn2_1~~~jf78554981
lcl|plasmidfinder~~~incn3_1~~~ef21913482
lcl|plasmidfinder~~~incn_1~~~ay04627683
lcl|plasmidfinder~~~incp(6)_1~~~jf78555084
lcl|plasmidfinder~~~incp(beta)_1_beta~~~u6719485
lcl|plasmidfinder~~~incq1_1~~~he65472686
lcl|plasmidfinder~~~incq2_1~~~fj69640487
lcl|plasmidfinder~~~incr_1~~~dq44957888
lcl|plasmidfinder~~~inct_1~~~ap00423789
lcl|plasmidfinder~~~incu_1~~~dq40110390
lcl|plasmidfinder~~~incw_1~~~ef63350791
lcl|plasmidfinder~~~incx1_1~~~eu37091392
lcl|plasmidfinder~~~incx1_2~~~cp00341793
lcl|plasmidfinder~~~incx1_3~~~cp00112394
lcl|plasmidfinder~~~incx1_4~~~jn93589895
lcl|plasmidfinder~~~incx2_1~~~jq26933596
lcl|plasmidfinder~~~incx3(pec14)_1_pec14~~~jn93589997
lcl|plasmidfinder~~~incx3_1~~~jn24785298
lcl|plasmidfinder~~~incx4_1~~~cp00289599
lcl|plasmidfinder~~~incx4_2~~~fn543504100
lcl|plasmidfinder~~~incx5_1~~~nc_015054101
lcl|plasmidfinder~~~incx6_1~~~am942760102
lcl|plasmidfinder~~~incy_1~~~k02380103
lcl|plasmidfinder~~~p0111_1~~~ap010962107
lcl|plasmidfinder~~~p1_alpha~~~bn000925104
lcl|plasmidfinder~~~padap_1~~~af135182108
lcl|plasmidfinder~~~pec4115_1~~~nc_011351109
lcl|plasmidfinder~~~pentas02_1~~~cp003028110
lcl|plasmidfinder~~~pesa2_1~~~cp000784111
lcl|plasmidfinder~~~pip31758(p153)_1_p153~~~cp000719112
lcl|plasmidfinder~~~pip31758(p59)_1_p59~~~cp000718113
lcl|plasmidfinder~~~pip32953_1~~~bx936400114
lcl|plasmidfinder~~~pjars36_1~~~nc_015068115
lcl|plasmidfinder~~~psl483_1~~~cp001137116
lcl|plasmidfinder~~~psm22_1~~~nc_015972117
lcl|plasmidfinder~~~pxuzhou21_1~~~cp001927118
lcl|plasmidfinder~~~pye854_1~~~am905950119
lcl|plasmidfinder~~~rep10_1_repl(pe5)~~~m17990120
lcl|plasmidfinder~~~rep10_2_cds1(pim13)~~~m13761121
lcl|plasmidfinder~~~rep10_3_orf(pne131)~~~nc001390122
lcl|plasmidfinder~~~rep10_5_repl(pwbg738)~~~dq088624.1123
lcl|plasmidfinder~~~rep10_6_rep(sap093b)~~~gq900442.1124
lcl|plasmidfinder~~~rep10b_1_rep(psk3)~~~nc001994125
lcl|plasmidfinder~~~rep10b_2_rep(psk6)~~~sau96610126
lcl|plasmidfinder~~~rep11_1_repa(pb82)~~~ab178871127
lcl|plasmidfinder~~~rep11_2_repa(pef1071)~~~af164559128
lcl|plasmidfinder~~~rep11_3_rep(pefr)~~~af511037129
lcl|plasmidfinder~~~rep12_1_cds32(pbmb67)~~~dq363750130
lcl|plasmidfinder~~~rep12_2_cds1(plasmid)~~~ay278324131
lcl|plasmidfinder~~~rep13_1_orf(pc194)~~~nc002013132
lcl|plasmidfinder~~~rep13_2_cds39(pssp1)~~~ap008935133
lcl|plasmidfinder~~~rep13_3_rep(pwbg1773)~~~ef537646134
lcl|plasmidfinder~~~rep13_4_rep(pkh13)~~~nc010426.1135
lcl|plasmidfinder~~~rep13_5_rep(pmc524/mbm)~~~aj312056.2136
lcl|plasmidfinder~~~rep14_1_cds2(pefnp1)~~~ab038522137
lcl|plasmidfinder~~~rep14_2_orf(pkq10)~~~efu01917138
lcl|plasmidfinder~~~rep14_3_orf(pri1)~~~eu327398139
lcl|plasmidfinder~~~rep15_1_repa(plw043)~~~ae017171140
lcl|plasmidfinder~~~rep16_1_cds8(psas)~~~bx571858141
lcl|plasmidfinder~~~rep16_2_cds6(psjh101)~~~cp000737142
lcl|plasmidfinder~~~rep16_3_rep(saa6159)~~~cp002115.1143
lcl|plasmidfinder~~~rep16_4_unknown(sap056a)~~~gq900478.1144
lcl|plasmidfinder~~~rep16_5_unknown(pwbg759)~~~gq900401.1145
lcl|plasmidfinder~~~rep16_6_unknown(sap071a)~~~gq900485.1146
lcl|plasmidfinder~~~rep16_7_rep(pbora53)~~~ay917098.1147
lcl|plasmidfinder~~~rep17_1_cds29(prum)~~~af507977148
lcl|plasmidfinder~~~rep18_1_repa(p200b)~~~ab158402149
lcl|plasmidfinder~~~rep18_2_repa(pef418)~~~af408195150
lcl|plasmidfinder~~~rep19_10_rep(pwbg746)~~~gq900390.1151
lcl|plasmidfinder~~~rep19_1_cds45(plew6932)~~~nc009130152
lcl|plasmidfinder~~~rep19_2_rep(psa1379)~~~nc007931153
lcl|plasmidfinder~~~rep19_3_cds20(psjh901)~~~cp000704154
lcl|plasmidfinder~~~rep19_4_repa(pub101)~~~nc005127155
lcl|plasmidfinder~~~rep19_5_rep(pwbg747)~~~gq900399.1156
lcl|plasmidfinder~~~rep19_6_orf34(edina)~~~ap003089.1157
lcl|plasmidfinder~~~rep19_7_repa(sap019a)~~~gq900385.1158
lcl|plasmidfinder~~~rep19_8_repa(pwbg759)~~~gq900401.1159
lcl|plasmidfinder~~~rep19_9_repa(ap071a)~~~gq900485.1160
lcl|plasmidfinder~~~rep1_1_repe(pambeta1)~~~af007787161
lcl|plasmidfinder~~~rep1_2_reps(pbt233)~~~x64695162
lcl|plasmidfinder~~~rep1_3_repr(pgb354)~~~u83488163
lcl|plasmidfinder~~~rep1_4_repe(orf17)~~~nc011140164
lcl|plasmidfinder~~~rep1_5_cds6(pre25)~~~x92945165
lcl|plasmidfinder~~~rep1_6_repe(ptef1)~~~ae016833166
lcl|plasmidfinder~~~rep20_10_repa(sap057a)~~~nc_013334.1167
lcl|plasmidfinder~~~rep20_11_repa(vrsap)~~~ap003367168
lcl|plasmidfinder~~~rep20_1_orf1(edina)~~~ap003089169
lcl|plasmidfinder~~~rep20_2_repa(pwbg753)~~~gq900395.1170
lcl|plasmidfinder~~~rep20_3_rep(ptw20)~~~fn433597.1171
lcl|plasmidfinder~~~rep20_4_repa(sap102a)~~~gq900496.1172
lcl|plasmidfinder~~~rep20_5_repa(psk23)~~~gq900491.1173
lcl|plasmidfinder~~~rep20_6_repa(sap059a)~~~gq900480.1174
lcl|plasmidfinder~~~rep20_7_repa(sap074a)~~~gq900426.1175
lcl|plasmidfinder~~~rep20_8_repa(sap063a)~~~gq900418.1176
lcl|plasmidfinder~~~rep20_9_repa(sap055a)~~~gq900414.1177
lcl|plasmidfinder~~~rep21_10_rep(pkh14)~~~eu164802.1178
lcl|plasmidfinder~~~rep21_11_rep(psa1308)~~~ab254848.1179
lcl|plasmidfinder~~~rep21_12_rep(pkh3)~~~af151117.1180
lcl|plasmidfinder~~~rep21_13_rep(sap101a)~~~gq900495.1181
lcl|plasmidfinder~~~rep21_14_rep(pkh21)~~~eu350088.1182
lcl|plasmidfinder~~~rep21_1_rep(pwbg754)~~~gq900396.1183
lcl|plasmidfinder~~~rep21_2_rep(pnvh01)~~~aj512814.1184
lcl|plasmidfinder~~~rep21_3_ps0385-3~~~am990995.1185
lcl|plasmidfinder~~~rep21_4_reprc(psk41)~~~af051917.1186
lcl|plasmidfinder~~~rep21_5_reprc(pgo1)~~~fm207042.1187
lcl|plasmidfinder~~~rep21_6_rep(pbmsa1)~~~ay541446.1188
lcl|plasmidfinder~~~rep21_7_rep(pwbg760)~~~gq900473.1189
lcl|plasmidfinder~~~rep21_8_rep(sap071a)~~~gq900485.1190
lcl|plasmidfinder~~~rep21_9_rep(pkh12)~~~eu168704.2191
lcl|plasmidfinder~~~rep22_1_repb(pub110)~~~x03408.1192
lcl|plasmidfinder~~~rep22_2_repu(pkks825)~~~fn377602.2193
lcl|plasmidfinder~~~rep23_1_rep(ppr9)~~~gu237136.1194
lcl|plasmidfinder~~~rep23_2_rep(pv030-8)~~~eu366902.1195
lcl|plasmidfinder~~~rep24_1_rep(pwbg745)~~~gq900389.1196
lcl|plasmidfinder~~~rep24_2_rep(pwbg749)~~~gq900391.1197
lcl|plasmidfinder~~~rep2_1_orf(e.faeciumcontig1183)_jdoe~~~198
lcl|plasmidfinder~~~rep2_2_repr(pef1)~~~dq198088199
lcl|plasmidfinder~~~rep3_1_rep63a(paw63)~~~bth011655200
lcl|plasmidfinder~~~rep3_2_rep165(pbmb165)~~~dq242517201
lcl|plasmidfinder~~~rep3_3_rep(pbt9727)~~~cp000047202
lcl|plasmidfinder~~~rep3_4_cds38(pox2)~~~nc002146203
lcl|plasmidfinder~~~rep4_1_cds2(pcrl291.1)~~~nc002799204
lcl|plasmidfinder~~~rep4_2_cds3(pkc5b)~~~af378372205
lcl|plasmidfinder~~~rep4_3_orf(pmbb1)~~~efu26268206
lcl|plasmidfinder~~~rep5_1_rep(pmw2)~~~nc005011207
lcl|plasmidfinder~~~rep5_2_rep(pn315)~~~ap003139208
lcl|plasmidfinder~~~rep5_3_rep(pwbg752)~~~gq900394.1209
lcl|plasmidfinder~~~rep5_4_rep(sap047a)~~~gq900405.1210
lcl|plasmidfinder~~~rep5_5_rep(prj6)~~~af241888.2211
lcl|plasmidfinder~~~rep5_6_rep(prj9)~~~af447813.1212
lcl|plasmidfinder~~~rep5_7_rep(pje1)~~~af051916.1213
lcl|plasmidfinder~~~rep6_1_repa(p703/5)~~~af109375214
lcl|plasmidfinder~~~rep7_10_repc(pkh17)~~~nc_010284.1215
lcl|plasmidfinder~~~rep7_12_rep(sap060b)~~~gq900417.1216
lcl|plasmidfinder~~~rep7_13_rep(psbk203)~~~u35036.1217
lcl|plasmidfinder~~~rep7_14_rep(mssa476)~~~bx571857.1218
lcl|plasmidfinder~~~rep7_15_rep(ps0385-2)~~~am990994.1219
lcl|plasmidfinder~~~rep7_16_repd~~~ay939911220
lcl|plasmidfinder~~~rep7_17_repc(ps0385-1)~~~am990993.1221
lcl|plasmidfinder~~~rep7_1_repc(cassette)~~~ab037671222
lcl|plasmidfinder~~~rep7_2_cds2(pc221)~~~nc002129223
lcl|plasmidfinder~~~rep7_3_cds1(pcw7)~~~j03323224
lcl|plasmidfinder~~~rep7_4_repd(pk214)~~~nc009751225
lcl|plasmidfinder~~~rep7_5_cds1(pkc5b)~~~af378372226
lcl|plasmidfinder~~~rep7_6_orf(pkh1)~~~sau38656227
lcl|plasmidfinder~~~rep7_7_rep(pkh7)~~~nc002096228
lcl|plasmidfinder~~~rep7_8_cds4(ps194)~~~nc005564229
lcl|plasmidfinder~~~rep7_9_cds3(pusa02)~~~nc007791230
lcl|plasmidfinder~~~rep7b_1_repj(pc223)~~~nc_005243.1231
lcl|plasmidfinder~~~rep7b_2_pvga~~~nc_011605.1232
lcl|plasmidfinder~~~rep7b_3_sap089a~~~gq900440.1233
lcl|plasmidfinder~~~rep8_1_ep002*(pam373)~~~nc002630234
lcl|plasmidfinder~~~rep8_2_repa(pej97-1)~~~aj49170235
lcl|plasmidfinder~~~rep9_1_repa(pad1)~~~l01794236
lcl|plasmidfinder~~~rep9_2_prgw(pcf10)~~~ay855841237
lcl|plasmidfinder~~~rep9_3_repa(ppd1)~~~d78016238
lcl|plasmidfinder~~~rep9_4_repa2(ptef2)~~~ae016831239
lcl|plasmidfinder~~~rep_1_pkpc-2~~~cp011573105
lcl|plasmidfinder~~~repa_1_pkpc-2~~~cp013325240
lcl|plasmidfinder~~~repa_2_pkpc-2~~~jx397875241
lcl|plasmidfinder~~~repus10__cds25(pssp1)~~~ap008935242
lcl|plasmidfinder~~~repus11__cds16(ptef3)~~~ae016832243
lcl|plasmidfinder~~~repus12__rep(pub110)~~~af181950244
lcl|plasmidfinder~~~repus15__orf(e.faecium287)~~~nzaaak010000287245
lcl|plasmidfinder~~~repus16__repf(pe194)~~~m17811.1246
lcl|plasmidfinder~~~repus17__rep(pkks825)~~~fn377602.2247
lcl|plasmidfinder~~~repus18__rep(pkks825)~~~fn377602.2248
lcl|plasmidfinder~~~repus19__rep(pdlk3)~~~gu562626.1249
lcl|plasmidfinder~~~repus1__orf(e.faeciumcontig1258)_jdoe~~~250
lcl|plasmidfinder~~~repus20__rep(pavx)~~~cp001784.1251
lcl|plasmidfinder~~~repus21__rep(pwbg764)~~~gq900468.1252
lcl|plasmidfinder~~~repus22__rep(sap015b)~~~gq900502.1253
lcl|plasmidfinder~~~repus23__repa(sap099b)~~~gq900449.1254
lcl|plasmidfinder~~~repus2__repa(pbi143)~~~bfu30316255
lcl|plasmidfinder~~~repus3__repm200(pbm200)~~~dq437521256
lcl|plasmidfinder~~~repus4__repa(pci2000)~~~af178424257
lcl|plasmidfinder~~~repus5__cds20(petb)~~~nc003265258
lcl|plasmidfinder~~~repus6__rep(pfl1)~~~nc002132259
lcl|plasmidfinder~~~repus7__rep(phtbeta)~~~ab183714260
lcl|plasmidfinder~~~repus8__orf1(pog32)~~~loppog32261
lcl|plasmidfinder~~~repus9__rep(psk1)~~~af203376262
lcl|plasmidfinder~~~trfa_1~~~cp11611106
plasmidfinder~~~col(bs512)_1__nc_010656_dupe~~~1
plasmidfinder~~~col(bs512)_1~~~nc_0106560
plasmidfinder~~~col(imgs31)_1~~~nc_0114062
plasmidfinder~~~col(irgk)_1~~~ay5430713
plasmidfinder~~~col(kphs6)_1~~~nc_0168414
plasmidfinder~~~col(mg828)_1~~~nc_0084865
plasmidfinder~~~col(mgd2)_1~~~nc_0037896
plasmidfinder~~~col(mp18)_1~~~nc_0136527
plasmidfinder~~~col(pwes)_1~~~dq26876413
plasmidfinder~~~col(sd853)_1~~~nc_0153928
plasmidfinder~~~col(vcm04)_1~~~hm2311659
plasmidfinder~~~col(yc)_1~~~nc_00214410
plasmidfinder~~~col(ye4449)_1~~~fj69640512
plasmidfinder~~~col(yf27601)_1~~~jf93765511
plasmidfinder~~~col156_1~~~nc_00978114
plasmidfinder~~~col3m_1~~~jx51406515
plasmidfinder~~~col8282_1~~~dq99535316
plasmidfinder~~~cole10_1~~~x0165417
plasmidfinder~~~colkp3_1~~~jn20580018
plasmidfinder~~~colpvc_1~~~jx13308820
plasmidfinder~~~colrnai_1~~~dq29801919
plasmidfinder~~~inca/c2_1~~~jn15780421
plasmidfinder~~~inca/c_1~~~fj70580722
plasmidfinder~~~incb/o/k/z_1~~~cu92814723
plasmidfinder~~~incb/o/k/z_2~~~gu25664124
plasmidfinder~~~incb/o/k/z_3~~~gq25988825
plasmidfinder~~~incb/o/k/z_4~~~fn86883226
plasmidfinder~~~incfia(hi1)_1_hi1~~~af25087827
plasmidfinder~~~incfia_1~~~ap00191828
plasmidfinder~~~incfib(ap001918)_1~~~ap00191829
plasmidfinder~~~incfib(k)_1_kpn3~~~jn23370430
plasmidfinder~~~incfib(mar)_1_pndm-mar~~~jn42033631
plasmidfinder~~~incfib(pb171)_1_pb171~~~ab02494633
plasmidfinder~~~incfib(pctu1)_1_pctu1~~~fn54309434
plasmidfinder~~~incfib(pctu3)_1_pctu3~~~fn54309635
plasmidfinder~~~incfib(pecla)_1_pecla~~~cp00191936
plasmidfinder~~~incfib(pentas01)_1_pentas01~~~cp00302737
plasmidfinder~~~incfib(pente01)_1_pente01~~~cp00065438
plasmidfinder~~~incfib(phcm2)_1_phcm2~~~al51338439
plasmidfinder~~~incfib(pkphs1)_1_pkphs1~~~cp00322340
plasmidfinder~~~incfib(plf82)_1_plf82~~~cu63887241
plasmidfinder~~~incfib(pqil)_1_pqil~~~jn23370542
plasmidfinder~~~incfib(s)_1~~~fn43203132
plasmidfinder~~~incfic(fii)_1~~~ap00191843
plasmidfinder~~~incfii(29)_1_puti89~~~cp00303544
plasmidfinder~~~incfii(k)_1~~~cp00064845
plasmidfinder~~~incfii(p14)_1_p14~~~jq41853851
plasmidfinder~~~incfii(p96a)_1_p96a~~~jq41852152
plasmidfinder~~~incfii(pcoo)_1_pcoo~~~cr94228555
plasmidfinder~~~incfii(pcry)_1_pcry~~~nc_00581453
plasmidfinder~~~incfii(pctu2)_1_pctu2~~~fn54309554
plasmidfinder~~~incfii(pecla)_1_pecla~~~cp00191956
plasmidfinder~~~incfii(penta)_1_penta~~~cp00302757
plasmidfinder~~~incfii(phn7a8)_1_phn7a8~~~jn23251758
plasmidfinder~~~incfii(pkpx1)~~~ap01205559
plasmidfinder~~~incfii(pmet)_1_pmet1~~~eu38301660
plasmidfinder~~~incfii(prsb107)_1_prsb107~~~aj85108961
plasmidfinder~~~incfii(pse11)_1_pse11~~~ap00924262
plasmidfinder~~~incfii(pseudo)_1_pseudo~~~nc_01175964
plasmidfinder~~~incfii(pyva12790)_1_pyva12790~~~ay15084363
plasmidfinder~~~incfii(s)_1~~~cp00085846
plasmidfinder~~~incfii(sarc14)_1_sarc14~~~jq41854047
plasmidfinder~~~incfii(serratia)_1_serratia~~~nc_00982948
plasmidfinder~~~incfii(y)_1_ps~~~cp00104949
plasmidfinder~~~incfii(yp)_1_yersenia~~~cp00067050
plasmidfinder~~~incfii_1_pkp91~~~cp00096666
plasmidfinder~~~incfii_1_psfo~~~af40129267
plasmidfinder~~~incfii_1~~~ay45801665
plasmidfinder~~~inchi1a(cit)_1_pndm-cit~~~jx18297568
plasmidfinder~~~inchi1a_1~~~af25087869
plasmidfinder~~~inchi1b(cit)_1_pndm-cit~~~jx18297570
plasmidfinder~~~inchi1b(r27)_1_r27~~~af25087871
plasmidfinder~~~inchi1b_1_pndm-mar~~~jn42033672
plasmidfinder~~~inchi2_1~~~bx66401574
plasmidfinder~~~inchi2a_1~~~bx66401573
plasmidfinder~~~inci1_1_alpha~~~ap00514775
plasmidfinder~~~inci2_1_delta~~~ap00252777
plasmidfinder~~~inci2_1~~~kp34712776
plasmidfinder~~~incl/m(pmu407)_1_pmu407~~~u2734578
plasmidfinder~~~incl/m(poxa-48)_1_poxa-48~~~jn62628679
plasmidfinder~~~incl/m_1~~~af55041580
plasmidfinder~~~incn2_1~~~jf78554981
plasmidfinder~~~incn3_1~~~ef21913482
plasmidfinder~~~incn_1~~~ay04627683
plasmidfinder~~~incp(6)_1~~~jf78555084
plasmidfinder~~~incp(beta)_1_beta~~~u6719485
plasmidfinder~~~incq1_1~~~he65472686
plasmidfinder~~~incq2_1~~~fj69640487
plasmidfinder~~~incr_1~~~dq44957888
plasmidfinder~~~inct_1~~~ap00423789
plasmidfinder~~~incu_1~~~dq40110390
plasmidfinder~~~incw_1~~~ef63350791
plasmidfinder~~~incx1_1~~~eu37091392
plasmidfinder~~~incx1_2~~~cp00341793
plasmidfinder~~~incx1_3~~~cp00112394
plasmidfinder~~~incx1_4~~~jn93589895
plasmidfinder~~~incx2_1~~~jq26933596
plasmidfinder~~~incx3(pec14)_1_pec14~~~jn93589997
plasmidfinder~~~incx3_1~~~jn24785298
plasmidfinder~~~incx4_1~~~cp00289599
plasmidfinder~~~incx4_2~~~fn543504100
plasmidfinder~~~incx5_1~~~nc_015054101
plasmidfinder~~~incx6_1~~~am942760102
plasmidfinder~~~incy_1~~~k02380103
plasmidfinder~~~p0111_1~~~ap010962107
plasmidfinder~~~p1_alpha~~~bn000925104
plasmidfinder~~~padap_1~~~af135182108
plasmidfinder~~~pec4115_1~~~nc_011351109
plasmidfinder~~~pentas02_1~~~cp003028110
plasmidfinder~~~pesa2_1~~~cp000784111
plasmidfinder~~~pip31758(p153)_1_p153~~~cp000719112
plasmidfinder~~~pip31758(p59)_1_p59~~~cp000718113
plasmidfinder~~~pip32953_1~~~bx936400114
plasmidfinder~~~pjars36_1~~~nc_015068115
plasmidfinder~~~psl483_1~~~cp001137116
plasmidfinder~~~psm22_1~~~nc_015972117
plasmidfinder~~~pxuzhou21_1~~~cp001927118
plasmidfinder~~~pye854_1~~~am905950119
plasmidfinder~~~rep10_1_repl(pe5)~~~m17990120
plasmidfinder~~~rep10_2_cds1(pim13)~~~m13761121
plasmidfinder~~~rep10_3_orf(pne131)~~~nc001390122
plasmidfinder~~~rep10_5_repl(pwbg738)~~~dq088624.1123
plasmidfinder~~~rep10_6_rep(sap093b)~~~gq900442.1124
plasmidfinder~~~rep10b_1_rep(psk3)~~~nc001994125
plasmidfinder~~~rep10b_2_rep(psk6)~~~sau96610126
plasmidfinder~~~rep11_1_repa(pb82)~~~ab178871127
plasmidfinder~~~rep11_2_repa(pef1071)~~~af164559128
plasmidfinder~~~rep11_3_rep(pefr)~~~af511037129
plasmidfinder~~~rep12_1_cds32(pbmb67)~~~dq363750130
plasmidfinder~~~rep12_2_cds1(plasmid)~~~ay278324131
plasmidfinder~~~rep13_1_orf(pc194)~~~nc002013132
plasmidfinder~~~rep13_2_cds39(pssp1)~~~ap008935133
plasmidfinder~~~rep13_3_rep(pwbg1773)~~~ef537646134
plasmidfinder~~~rep13_4_rep(pkh13)~~~nc010426.1135
plasmidfinder~~~rep13_5_rep(pmc524/mbm)~~~aj312056.2136
plasmidfinder~~~rep14_1_cds2(pefnp1)~~~ab038522137
plasmidfinder~~~rep14_2_orf(pkq10)~~~efu01917138
plasmidfinder~~~rep14_3_orf(pri1)~~~eu327398139
plasmidfinder~~~rep15_1_repa(plw043)~~~ae017171140
plasmidfinder~~~rep16_1_cds8(psas)~~~bx571858141
plasmidfinder~~~rep16_2_cds6(psjh101)~~~cp000737142
plasmidfinder~~~rep16_3_rep(saa6159)~~~cp002115.1143
plasmidfinder~~~rep16_4_unknown(sap056a)~~~gq900478.1144
plasmidfinder~~~rep16_5_unknown(pwbg759)~~~gq900401.1145
plasmidfinder~~~rep16_6_unknown(sap071a)~~~gq900485.1146
plasmidfinder~~~rep16_7_rep(pbora53)~~~ay917098.1147
plasmidfinder~~~rep17_1_cds29(prum)~~~af507977148
plasmidfinder~~~rep18_1_repa(p200b)~~~ab158402149
plasmidfinder~~~rep18_2_repa(pef418)~~~af408195150
plasmidfinder~~~rep19_10_rep(pwbg746)~~~gq900390.1151
plasmidfinder~~~rep19_1_cds45(plew6932)~~~nc009130152
plasmidfinder~~~rep19_2_rep(psa1379)~~~nc007931153
plasmidfinder~~~rep19_3_cds20(psjh901)~~~cp000704154
plasmidfinder~~~rep19_4_repa(pub101)~~~nc005127155
plasmidfinder~~~rep19_5_rep(pwbg747)~~~gq900399.1156
plasmidfinder~~~rep19_6_orf34(edina)~~~ap003089.1157
plasmidfinder~~~rep19_7_repa(sap019a)~~~gq900385.1158
plasmidfinder~~~rep19_8_repa(pwbg759)~~~gq900401.1159
plasmidfinder~~~rep19_9_repa(ap071a)~~~gq900485.1160
plasmidfinder~~~rep1_1_repe(pambeta1)~~~af007787161
plasmidfinder~~~rep1_2_reps(pbt233)~~~x64695162
plasmidfinder~~~rep1_3_repr(pgb354)~~~u83488163
plasmidfinder~~~rep1_4_repe(orf17)~~~nc011140164
plasmidfinder~~~rep1_5_cds6(pre25)~~~x92945165
plasmidfinder~~~rep1_6_repe(ptef1)~~~ae016833166
plasmidfinder~~~rep20_10_repa(sap057a)~~~nc_013334.1167
plasmidfinder~~~rep20_11_repa(vrsap)~~~ap003367168
plasmidfinder~~~rep20_1_orf1(edina)~~~ap003089169
plasmidfinder~~~rep20_2_repa(pwbg753)~~~gq900395.1170
plasmidfinder~~~rep20_3_rep(ptw20)~~~fn433597.1171
plasmidfinder~~~rep20_4_repa(sap102a)~~~gq900496.1172
plasmidfinder~~~rep20_5_repa(psk23)~~~gq900491.1173
plasmidfinder~~~rep20_6_repa(sap059a)~~~gq900480.1174
plasmidfinder~~~rep20_7_repa(sap074a)~~~gq900426.1175
plasmidfinder~~~rep20_8_repa(sap063a)~~~gq900418.1176
plasmidfinder~~~rep20_9_repa(sap055a)~~~gq900414.1177
plasmidfinder~~~rep21_10_rep(pkh14)~~~eu164802.1178
plasmidfinder~~~rep21_11_rep(psa1308)~~~ab254848.1179
plasmidfinder~~~rep21_12_rep(pkh3)~~~af151117.1180
plasmidfinder~~~rep21_13_rep(sap101a)~~~gq900495.1181
plasmidfinder~~~rep21_14_rep(pkh21)~~~eu350088.1182
plasmidfinder~~~rep21_1_rep(pwbg754)~~~gq900396.1183
plasmidfinder~~~rep21_2_rep(pnvh01)~~~aj512814.1184
plasmidfinder~~~rep21_3_ps0385-3~~~am990995.1185
plasmidfinder~~~rep21_4_reprc(psk41)~~~af051917.1186
plasmidfinder~~~rep21_5_reprc(pgo1)~~~fm207042.1187
plasmidfinder~~~rep21_6_rep(pbmsa1)~~~ay541446.1188
plasmidfinder~~~rep21_7_rep(pwbg760)~~~gq900473.1189
plasmidfinder~~~rep21_8_rep(sap071a)~~~gq900485.1190
plasmidfinder~~~rep21_9_rep(pkh12)~~~eu168704.2191
plasmidfinder~~~rep22_1_repb(pub110)~~~x03408.1192
plasmidfinder~~~rep22_2_repu(pkks825)~~~fn377602.2193
plasmidfinder~~~rep23_1_rep(ppr9)~~~gu237136.1194
plasmidfinder~~~rep23_2_rep(pv030-8)~~~eu366902.1195
plasmidfinder~~~rep24_1_rep(pwbg745)~~~gq900389.1196
plasmidfinder~~~rep24_2_rep(pwbg749)~~~gq900391.1197
plasmidfinder~~~rep2_1_orf(e.faeciumcontig1183)_jdoe~~~198
plasmidfinder~~~rep2_2_repr(pef1)~~~dq198088199
plasmidfinder~~~rep3_1_rep63a(paw63)~~~bth011655200
plasmidfinder~~~rep3_2_rep165(pbmb165)~~~dq242517201
plasmidfinder~~~rep3_3_rep(pbt9727)~~~cp000047202
plasmidfinder~~~rep3_4_cds38(pox2)~~~nc002146203
plasmidfinder~~~rep4_1_cds2(pcrl291.1)~~~nc002799204
plasmidfinder~~~rep4_2_cds3(pkc5b)~~~af378372205
plasmidfinder~~~rep4_3_orf(pmbb1)~~~efu26268206
plasmidfinder~~~rep5_1_rep(pmw2)~~~nc005011207
plasmidfinder~~~rep5_2_rep(pn315)~~~ap003139208
plasmidfinder~~~rep5_3_rep(pwbg752)~~~gq900394.1209
plasmidfinder~~~rep5_4_rep(sap047a)~~~gq900405.1210
plasmidfinder~~~rep5_5_rep(prj6)~~~af241888.2211
plasmidfinder~~~rep5_6_rep(prj9)~~~af447813.1212
plasmidfinder~~~rep5_7_rep(pje1)~~~af051916.1213
plasmidfinder~~~rep6_1_repa(p703/5)~~~af109375214
plasmidfinder~~~rep7_10_repc(pkh17)~~~nc_010284.1215
plasmidfinder~~~rep7_12_rep(sap060b)~~~gq900417.1216
plasmidfinder~~~rep7_13_rep(psbk203)~~~u35036.1217
plasmidfinder~~~rep7_14_rep(mssa476)~~~bx571857.1218
plasmidfinder~~~rep7_15_rep(ps0385-2)~~~am990994.1219
plasmidfinder~~~rep7_16_repd~~~ay939911220
plasmidfinder~~~rep7_17_repc(ps0385-1)~~~am990993.1221
plasmidfinder~~~rep7_1_repc(cassette)~~~ab037671222
plasmidfinder~~~rep7_2_cds2(pc221)~~~nc002129223
plasmidfinder~~~rep7_3_cds1(pcw7)~~~j03323224
plasmidfinder~~~rep7_4_repd(pk214)~~~nc009751225
plasmidfinder~~~rep7_5_cds1(pkc5b)~~~af378372226
plasmidfinder~~~rep7_6_orf(pkh1)~~~sau38656227
plasmidfinder~~~rep7_7_rep(pkh7)~~~nc002096228
plasmidfinder~~~rep7_8_cds4(ps194)~~~nc005564229
plasmidfinder~~~rep7_9_cds3(pusa02)~~~nc007791230
plasmidfinder~~~rep7b_1_repj(pc223)~~~nc_005243.1231
plasmidfinder~~~rep7b_2_pvga~~~nc_011605.1232
plasmidfinder~~~rep7b_3_sap089a~~~gq900440.1233
plasmidfinder~~~rep8_1_ep002*(pam373)~~~nc002630234
plasmidfinder~~~rep8_2_repa(pej97-1)~~~aj49170235
plasmidfinder~~~rep9_1_repa(pad1)~~~l01794236
plasmidfinder~~~rep9_2_prgw(pcf10)~~~ay855841237
plasmidfinder~~~rep9_3_repa(ppd1)~~~d78016238
plasmidfinder~~~rep9_4_repa2(ptef2)~~~ae016831239
plasmidfinder~~~rep_1_pkpc-2~~~cp011573105
plasmidfinder~~~repa_1_pkpc-2~~~cp013325240
plasmidfinder~~~repa_2_pkpc-2~~~jx397875241
plasmidfinder~~~repus10__cds25(pssp1)~~~ap008935242
plasmidfinder~~~repus11__cds16(ptef3)~~~ae016832243
plasmidfinder~~~repus12__rep(pub110)~~~af181950244
plasmidfinder~~~repus15__orf(e.faecium287)~~~nzaaak010000287245
plasmidfinder~~~repus16__repf(pe194)~~~m17811.1246
plasmidfinder~~~repus17__rep(pkks825)~~~fn377602.2247
plasmidfinder~~~repus18__rep(pkks825)~~~fn377602.2248
plasmidfinder~~~repus19__rep(pdlk3)~~~gu562626.1249
plasmidfinder~~~repus1__orf(e.faeciumcontig1258)_jdoe~~~250
plasmidfinder~~~repus20__rep(pavx)~~~cp001784.1251
plasmidfinder~~~repus21__rep(pwbg764)~~~gq900468.1252
plasmidfinder~~~repus22__rep(sap015b)~~~gq900502.1253
plasmidfinder~~~repus23__repa(sap099b)~~~gq900449.1254
plasmidfinder~~~repus2__repa(pbi143)~~~bfu30316255
plasmidfinder~~~repus3__repm200(pbm200)~~~dq437521256
plasmidfinder~~~repus4__repa(pci2000)~~~af178424257
plasmidfinder~~~repus5__cds20(petb)~~~nc003265258
plasmidfinder~~~repus6__rep(pfl1)~~~nc002132259
plasmidfinder~~~repus7__rep(phtbeta)~~~ab183714260
plasmidfinder~~~repus8__orf1(pog32)~~~loppog32261
plasmidfinder~~~repus9__rep(psk1)~~~af203376262
plasmidfinder~~~trfa_1~~~cp11611106