Mercurial > repos > jjkoehorst > sapp

annotate rnaseq/cutadapt/test-data/gff_filter_attr_in1.gff @ 13:1efd1975a68d

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cutadapters sample added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:58:00 +0100
parents a712b378e090
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1 chr1 Cufflinks exon 21199802 21199861 1000 + . gene_id "CUFF.1383"; transcript_id "CUFF.1383.1"; exon_number "1"; FPKM "5.0037092300"; frac "1.000000"; conf_lo "0.000000"; conf_hi "15.011128"; cov "0.284211";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
2 chr1 Cufflinks transcript 55716264 55716295 1000 . . gene_id "CUFF.5021"; transcript_id "CUFF.5021.1"; FPKM "29.7095235531"; frac "1.000000"; conf_lo "0.000000"; conf_hi "71.725135"; cov "1.687500";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
3 chr1 Cufflinks transcript 74904128 74904154 1000 . . gene_id "CUFF.7563"; transcript_id "CUFF.7563.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
4 chr1 Cufflinks exon 134487086 134487123 1000 . . gene_id "CUFF.11837"; transcript_id "CUFF.11837.1"; exon_number "1"; FPKM "25.0185461500"; frac "1.000000"; conf_lo "0.000000"; conf_hi "60.400113"; cov "1.421053";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
5 chr1 Cufflinks exon 136200923 136200959 1000 . . gene_id "CUFF.12099"; transcript_id "CUFF.12099.1"; exon_number "1"; FPKM "38.5420846095"; frac "1.000000"; conf_lo "0.000000"; conf_hi "83.046650"; cov "2.189189";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
6 chr1 Cufflinks transcript 138116837 138116866 1000 . . gene_id "CUFF.12557"; transcript_id "CUFF.12557.1"; FPKM "31.6901584567"; frac "1.000000"; conf_lo "0.000000"; conf_hi "76.506810"; cov "1.800000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
7 chr1 Cufflinks exon 152240694 152240779 1000 . . gene_id "CUFF.13107"; transcript_id "CUFF.13107.1"; exon_number "1"; FPKM "16.5820596576"; frac "1.000000"; conf_lo "0.000000"; conf_hi "35.729373"; cov "0.941860";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
8 chr1 Cufflinks exon 157633998 157634024 1000 . . gene_id "CUFF.13967"; transcript_id "CUFF.13967.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
9 chr1 Cufflinks exon 167704819 167704854 1000 . . gene_id "CUFF.15347"; transcript_id "CUFF.15347.1"; exon_number "1"; FPKM "26.4084653806"; frac "1.000000"; conf_lo "0.000000"; conf_hi "63.755675"; cov "1.500000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
10 chr1 Cufflinks transcript 184245403 184245429 1000 . . gene_id "CUFF.17679"; transcript_id "CUFF.17679.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
11 chr10 Cufflinks exon 12731734 12731826 1000 . . gene_id "CUFF.19287"; transcript_id "CUFF.19287.1"; exon_number "1"; FPKM "10.2226317602"; frac "1.000000"; conf_lo "0.000000"; conf_hi "24.679616"; cov "0.580645";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
12 chr10 Cufflinks transcript 42305464 42305515 1000 . . gene_id "CUFF.21709"; transcript_id "CUFF.21709.1"; FPKM "18.2827837250"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.138544"; cov "1.038462";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
13 chr10 Cufflinks exon 52431636 52431662 1000 . . gene_id "CUFF.22495"; transcript_id "CUFF.22495.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
14 chr10 Cufflinks transcript 62044837 62045189 1000 . . gene_id "CUFF.23531"; transcript_id "CUFF.23531.1"; FPKM "19.5178121606"; frac "1.000000"; conf_lo "9.264456"; conf_hi "29.771168"; cov "1.108611";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
15 chr10 Cufflinks transcript 75372919 75373002 1000 . . gene_id "CUFF.24985"; transcript_id "CUFF.24985.1"; FPKM "124.4970510798"; frac "1.000000"; conf_lo "71.411330"; conf_hi "177.582772"; cov "7.071429";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
16 chr10 Cufflinks transcript 80362428 80363292 1000 - . gene_id "CUFF.26065"; transcript_id "CUFF.26065.1"; FPKM "43.6170921216"; frac "1.000000"; conf_lo "32.260169"; conf_hi "54.974016"; cov "2.477449";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
17 chr10 Cufflinks exon 87908564 87908597 1000 + . gene_id "CUFF.27209"; transcript_id "CUFF.27209.1"; exon_number "2"; FPKM "11.4913582411"; frac "1.000000"; conf_lo "0.000000"; conf_hi "30.264098"; cov "0.652709";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
18 chr10 Cufflinks exon 89142681 89142707 1000 . . gene_id "CUFF.27307"; transcript_id "CUFF.27307.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
19 chr10 Cufflinks exon 93425781 93425807 1000 . . gene_id "CUFF.28101"; transcript_id "CUFF.28101.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
20 chr10 Cufflinks exon 108207916 108207986 1000 . . gene_id "CUFF.29319"; transcript_id "CUFF.29319.1"; exon_number "1"; FPKM "13.3902077986"; frac "1.000000"; conf_lo "0.000000"; conf_hi "32.326821"; cov "0.760563";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
21 chr10 Cufflinks transcript 117583959 117584039 1000 . . gene_id "CUFF.30522"; transcript_id "CUFF.30522.1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "37.934890"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
22 chr11 Cufflinks transcript 3357264 3357347 1000 . . gene_id "CUFF.32520"; transcript_id "CUFF.32520.1"; FPKM "16.9768706018"; frac "1.000000"; conf_lo "0.000000"; conf_hi "36.580072"; cov "0.964286";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
23 chr11 Cufflinks transcript 5005248 5005351 1000 . . gene_id "CUFF.33024"; transcript_id "CUFF.33024.1"; FPKM "9.1413918625"; frac "1.000000"; conf_lo "0.000000"; conf_hi "22.069272"; cov "0.519231";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
24 chr11 Cufflinks transcript 7904565 7904642 1000 . . gene_id "CUFF.33508"; transcript_id "CUFF.33508.1"; FPKM "61.6484988869"; frac "1.000000"; conf_lo "22.882428"; conf_hi "100.414569"; cov "3.501633";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
25 chr11 Cufflinks exon 49932116 49932142 1000 . . gene_id "CUFF.37546"; transcript_id "CUFF.37546.1"; exon_number "1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.816931"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
26 chr11 Cufflinks transcript 60046420 60046446 1000 . . gene_id "CUFF.39152"; transcript_id "CUFF.39152.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
27 chr11 Cufflinks exon 78140156 78140259 1000 . . gene_id "CUFF.43148"; transcript_id "CUFF.43148.1"; exon_number "1"; FPKM "54.8483511750"; frac "1.000000"; conf_lo "23.181641"; conf_hi "86.515061"; cov "3.115385";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
28 chr11 Cufflinks transcript 79846512 79846547 1000 . . gene_id "CUFF.43570"; transcript_id "CUFF.43570.1"; FPKM "26.4084653806"; frac "1.000000"; conf_lo "0.000000"; conf_hi "63.755675"; cov "1.500000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
29 chr11 Cufflinks transcript 85583926 85583952 1000 . . gene_id "CUFF.44478"; transcript_id "CUFF.44478.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
30 chr11 Cufflinks transcript 98554214 98554301 1000 . . gene_id "CUFF.46823"; transcript_id "CUFF.46823.1"; FPKM "10.8034631102"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.081867"; cov "0.613636";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
31 chr11 Cufflinks transcript 100797512 100797539 1000 . . gene_id "CUFF.47191"; transcript_id "CUFF.47191.1"; FPKM "33.9537412036"; frac "1.000000"; conf_lo "0.000000"; conf_hi "81.971583"; cov "1.928571";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
32 chr11 Cufflinks exon 105616462 105616737 1000 . . gene_id "CUFF.48385"; transcript_id "CUFF.48385.1"; exon_number "1"; FPKM "18.9452034252"; frac "1.000000"; conf_lo "7.520816"; conf_hi "30.369591"; cov "1.076087";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
33 chr11 Cufflinks transcript 106985457 106985483 1000 . . gene_id "CUFF.48949"; transcript_id "CUFF.48949.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
34 chr11 Cufflinks exon 120257794 120257821 1000 . . gene_id "CUFF.51205"; transcript_id "CUFF.51205.1"; exon_number "1"; FPKM "50.9306118054"; frac "1.000000"; conf_lo "0.000000"; conf_hi "109.740217"; cov "2.892857";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
35 chr12 Cufflinks transcript 16542765 16542791 1000 . . gene_id "CUFF.52907"; transcript_id "CUFF.52907.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
36 chr12 Cufflinks exon 21319385 21319483 1000 . . gene_id "CUFF.53189"; transcript_id "CUFF.53189.1"; exon_number "1"; FPKM "9.6030783202"; frac "1.000000"; conf_lo "0.000000"; conf_hi "23.183882"; cov "0.545455";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
37 chr12 Cufflinks transcript 30469129 30469156 1000 . . gene_id "CUFF.53733"; transcript_id "CUFF.53733.1"; FPKM "33.9537412036"; frac "1.000000"; conf_lo "0.000000"; conf_hi "81.971583"; cov "1.928571";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
38 chr12 Cufflinks transcript 30557416 30557442 1000 . . gene_id "CUFF.53863"; transcript_id "CUFF.53863.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
39 chr12 Cufflinks exon 30701762 30702509 1000 . . gene_id "CUFF.53897"; transcript_id "CUFF.53897.1"; exon_number "1"; FPKM "48.9333329111"; frac "1.000000"; conf_lo "37.780391"; conf_hi "60.086275"; cov "2.779412";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
40 chr12 Cufflinks transcript 56895077 56895103 1000 . . gene_id "CUFF.55817"; transcript_id "CUFF.55817.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
41 chr12 Cufflinks transcript 81915713 81915797 1000 . . gene_id "CUFF.58203"; transcript_id "CUFF.58203.1"; FPKM "22.3695236165"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.739047"; cov "1.270588";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
42 chr12 Cufflinks transcript 118458135 118458232 1000 . . gene_id "CUFF.63640"; transcript_id "CUFF.63640.1"; FPKM "9.7010689153"; frac "1.000000"; conf_lo "0.000000"; conf_hi "23.420452"; cov "0.551020";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
43 chr13 Cufflinks exon 8262302 8262372 1000 . . gene_id "CUFF.64064"; transcript_id "CUFF.64064.1"; exon_number "1"; FPKM "13.3902077986"; frac "1.000000"; conf_lo "0.000000"; conf_hi "32.326821"; cov "0.760563";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
44 chr13 Cufflinks transcript 14110852 14110956 1000 . . gene_id "CUFF.64684"; transcript_id "CUFF.64684.1"; FPKM "13.5814964814"; frac "1.000000"; conf_lo "0.000000"; conf_hi "29.264058"; cov "0.771429";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
45 chr13 Cufflinks transcript 14146567 14146593 1000 . . gene_id "CUFF.64702"; transcript_id "CUFF.64702.1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.816931"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
46 chr13 Cufflinks transcript 14564150 14564243 1000 . . gene_id "CUFF.64894"; transcript_id "CUFF.64894.1"; FPKM "15.1708205378"; frac "1.000000"; conf_lo "0.000000"; conf_hi "32.688575"; cov "0.861702";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
47 chr13 Cufflinks transcript 17823162 17823188 1000 . . gene_id "CUFF.65082"; transcript_id "CUFF.65082.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
48 chr13 Cufflinks transcript 29757640 29757666 1000 . . gene_id "CUFF.65972"; transcript_id "CUFF.65972.1"; FPKM "70.4225743482"; frac "1.000000"; conf_lo "0.000000"; conf_hi "140.845149"; cov "4.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
49 chr13 Cufflinks transcript 42402998 42403051 1000 . . gene_id "CUFF.66816"; transcript_id "CUFF.66816.1"; FPKM "26.4084653806"; frac "1.000000"; conf_lo "0.000000"; conf_hi "56.902335"; cov "1.500000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
50 chr13 Cufflinks transcript 42853325 42853406 1000 . . gene_id "CUFF.66850"; transcript_id "CUFF.66850.1"; FPKM "17.3909406165"; frac "1.000000"; conf_lo "0.000000"; conf_hi "37.472269"; cov "0.987805";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
51 chr13 Cufflinks exon 42990504 42990546 1000 . . gene_id "CUFF.66994"; transcript_id "CUFF.66994.1"; exon_number "1"; FPKM "33.1641193151"; frac "1.000000"; conf_lo "0.000000"; conf_hi "71.458746"; cov "1.883721";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
52 chr13 Cufflinks exon 49159496 49159569 1000 . . gene_id "CUFF.67788"; transcript_id "CUFF.67788.1"; exon_number "1"; FPKM "44.9657653777"; frac "1.000000"; conf_lo "10.974842"; conf_hi "78.956689"; cov "2.554054";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
53 chr13 Cufflinks exon 49243161 49243187 1000 + . gene_id "CUFF.67842"; transcript_id "CUFF.67842.1"; exon_number "2"; FPKM "17.3246767151"; frac "1.000000"; conf_lo "0.000000"; conf_hi "35.848677"; cov "0.984041";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
54 chr13 Cufflinks transcript 74671517 74671579 1000 . . gene_id "CUFF.70454"; transcript_id "CUFF.70454.1"; FPKM "18.8363155420"; frac "1.000000"; conf_lo "0.000000"; conf_hi "42.679570"; cov "1.069902";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
55 chr13 Cufflinks exon 100759121 100759147 1000 . . gene_id "CUFF.72728"; transcript_id "CUFF.72728.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
56 chr13 Cufflinks transcript 100200304 100200330 1000 . . gene_id "CUFF.73108"; transcript_id "CUFF.73108.1"; FPKM "123.2395051093"; frac "1.000000"; conf_lo "30.079196"; conf_hi "216.399814"; cov "7.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
57 chr13 Cufflinks exon 107766857 107766915 1000 . . gene_id "CUFF.73428"; transcript_id "CUFF.73428.1"; exon_number "1"; FPKM "16.1136398932"; frac "1.000000"; conf_lo "0.000000"; conf_hi "38.901768"; cov "0.915254";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
58 chr13 Cufflinks transcript 115623552 115623640 1000 . . gene_id "CUFF.74362"; transcript_id "CUFF.74362.1"; FPKM "21.3641517686"; frac "1.000000"; conf_lo "0.000000"; conf_hi "42.728304"; cov "1.213483";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
59 chr14 Cufflinks transcript 31651249 31651275 1000 . . gene_id "CUFF.77182"; transcript_id "CUFF.77182.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
60 chr14 Cufflinks transcript 31949103 31949152 1000 . . gene_id "CUFF.77316"; transcript_id "CUFF.77316.1"; FPKM "85.5634278330"; frac "1.000000"; conf_lo "28.521143"; conf_hi "142.605713"; cov "4.860000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
61 chr14 Cufflinks transcript 32190589 32190685 1000 . . gene_id "CUFF.77438"; transcript_id "CUFF.77438.1"; FPKM "14.7016199026"; frac "1.000000"; conf_lo "0.000000"; conf_hi "31.677588"; cov "0.835052";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
62 chr14 Cufflinks exon 55013239 55013265 1000 . . gene_id "CUFF.79372"; transcript_id "CUFF.79372.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
63 chr14 Cufflinks exon 55250464 55250514 1000 . . gene_id "CUFF.79616"; transcript_id "CUFF.79616.1"; exon_number "1"; FPKM "18.6412696804"; frac "1.000000"; conf_lo "0.000000"; conf_hi "45.004006"; cov "1.058824";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
64 chr14 Cufflinks exon 67604227 67604668 1000 . . gene_id "CUFF.81446"; transcript_id "CUFF.81446.1"; exon_number "1"; FPKM "123.6776546104"; frac "1.000000"; conf_lo "100.611653"; conf_hi "146.743656"; cov "7.024887";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
65 chr14 Cufflinks exon 75165582 75165744 1000 . . gene_id "CUFF.82088"; transcript_id "CUFF.82088.1"; exon_number "1"; FPKM "20.4139057543"; frac "1.000000"; conf_lo "4.982443"; conf_hi "35.845368"; cov "1.159509";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
66 chr15 Cufflinks transcript 8254591 8254734 1000 . . gene_id "CUFF.85556"; transcript_id "CUFF.85556.1"; FPKM "13.2042326903"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.408465"; cov "0.750000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
67 chr15 Cufflinks transcript 34371407 34371433 1000 . . gene_id "CUFF.87246"; transcript_id "CUFF.87246.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
68 chr15 Cufflinks exon 65980225 65980255 1000 + . gene_id "CUFF.89502"; transcript_id "CUFF.89502.1"; exon_number "2"; FPKM "14.1193775302"; frac "1.000000"; conf_lo "0.000000"; conf_hi "30.423030"; cov "0.801980";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
69 chr15 Cufflinks transcript 85895971 85896018 1000 . . gene_id "CUFF.92834"; transcript_id "CUFF.92834.1"; FPKM "19.8063490354"; frac "1.000000"; conf_lo "0.000000"; conf_hi "47.816756"; cov "1.125000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
70 chr15 Cufflinks exon 90828279 90828371 1000 . . gene_id "CUFF.93426"; transcript_id "CUFF.93426.1"; exon_number "1"; FPKM "15.3339476403"; frac "1.000000"; conf_lo "0.000000"; conf_hi "33.040065"; cov "0.870968";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
71 chr15 Cufflinks exon 99013431 99013472 1000 . . gene_id "CUFF.94604"; transcript_id "CUFF.94604.1"; exon_number "1"; FPKM "22.6358274691"; frac "1.000000"; conf_lo "0.000000"; conf_hi "54.647722"; cov "1.285714";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
72 chr15 Cufflinks transcript 102336976 102337075 1000 . . gene_id "CUFF.95298"; transcript_id "CUFF.95298.1"; FPKM "9.5070475370"; frac "1.000000"; conf_lo "0.000000"; conf_hi "22.952043"; cov "0.540000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
73 chr16 Cufflinks transcript 10417989 10425202 1000 - . gene_id "CUFF.97232"; transcript_id "CUFF.97232.1"; FPKM "21.1642179587"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.805591"; cov "1.202127";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
74 chr16 Cufflinks transcript 40788986 40789084 1000 . . gene_id "CUFF.101774"; transcript_id "CUFF.101774.1"; FPKM "9.6030783202"; frac "1.000000"; conf_lo "0.000000"; conf_hi "23.183882"; cov "0.545455";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
75 chr16 Cufflinks transcript 57154027 57154067 1000 . . gene_id "CUFF.103364"; transcript_id "CUFF.103364.1"; FPKM "162.3154457537"; frac "1.000000"; conf_lo "75.554191"; conf_hi "249.076701"; cov "9.219512";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
76 chr16 Cufflinks exon 74862302 74862560 1000 . . gene_id "CUFF.105450"; transcript_id "CUFF.105450.1"; exon_number "1"; FPKM "11.0120241741"; frac "1.000000"; conf_lo "2.020744"; conf_hi "20.003304"; cov "0.625483";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
77 chr16 Cufflinks exon 91023578 91023669 1000 . . gene_id "CUFF.106912"; transcript_id "CUFF.106912.1"; exon_number "1"; FPKM "10.3337473228"; frac "1.000000"; conf_lo "0.000000"; conf_hi "24.947873"; cov "0.586957";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
78 chr16 Cufflinks transcript 98168779 98168914 1000 . . gene_id "CUFF.107834"; transcript_id "CUFF.107834.1"; FPKM "24.4666664555"; frac "1.000000"; conf_lo "5.971605"; conf_hi "42.961728"; cov "1.389706";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
79 chr17 Cufflinks exon 8483212 8483268 1000 . . gene_id "CUFF.108498"; transcript_id "CUFF.108498.1"; exon_number "1"; FPKM "50.0370923000"; frac "1.000000"; conf_lo "9.181978"; conf_hi "90.892207"; cov "2.842105";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
80 chr17 Cufflinks transcript 17478023 17478102 1000 . . gene_id "CUFF.109264"; transcript_id "CUFF.109264.1"; FPKM "23.7676188425"; frac "1.000000"; conf_lo "0.000000"; conf_hi "47.535238"; cov "1.350000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
81 chr17 Cufflinks exon 24611086 24611151 1000 . . gene_id "CUFF.110088"; transcript_id "CUFF.110088.1"; exon_number "1"; FPKM "21.6069262205"; frac "1.000000"; conf_lo "0.000000"; conf_hi "46.556456"; cov "1.227273";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
82 chr17 Cufflinks exon 30355791 30355913 1000 . . gene_id "CUFF.111759"; transcript_id "CUFF.111759.1"; exon_number "1"; FPKM "19.3232673516"; frac "1.000000"; conf_lo "2.040012"; conf_hi "36.606523"; cov "1.097561";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
83 chr17 Cufflinks exon 31608702 31608787 1000 . . gene_id "CUFF.111943"; transcript_id "CUFF.111943.1"; exon_number "1"; FPKM "16.5820596576"; frac "1.000000"; conf_lo "0.000000"; conf_hi "35.729373"; cov "0.941860";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
84 chr17 Cufflinks transcript 32414547 32414573 1000 . . gene_id "CUFF.112117"; transcript_id "CUFF.112117.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
85 chr17 Cufflinks transcript 33245409 33245463 1000 . . gene_id "CUFF.112363"; transcript_id "CUFF.112363.1"; FPKM "17.2855409764"; frac "1.000000"; conf_lo "0.000000"; conf_hi "41.730987"; cov "0.981818";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
86 chr17 Cufflinks transcript 56750339 56750374 1000 . . gene_id "CUFF.115617"; transcript_id "CUFF.115617.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "105.633862"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
87 chr17 Cufflinks transcript 57144800 57144939 1000 . . gene_id "CUFF.115679"; transcript_id "CUFF.115679.1"; FPKM "13.5814964814"; frac "1.000000"; conf_lo "0.000000"; conf_hi "27.162993"; cov "0.771429";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
88 chr17 Cufflinks exon 71694628 71694708 1000 . . gene_id "CUFF.117117"; transcript_id "CUFF.117117.1"; exon_number "1"; FPKM "23.4741914494"; frac "1.000000"; conf_lo "0.000000"; conf_hi "46.948383"; cov "1.333333";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
89 chr17 Cufflinks transcript 71698227 71698263 1000 . . gene_id "CUFF.117119"; transcript_id "CUFF.117119.1"; FPKM "25.6947230730"; frac "1.000000"; conf_lo "0.000000"; conf_hi "62.032549"; cov "1.459459";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
90 chr17 Cufflinks exon 87862079 87862105 1000 . . gene_id "CUFF.118851"; transcript_id "CUFF.118851.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
91 chr18 Cufflinks transcript 39571718 39571880 1000 . . gene_id "CUFF.123569"; transcript_id "CUFF.123569.1"; FPKM "20.4139057543"; frac "1.000000"; conf_lo "4.982443"; conf_hi "35.845368"; cov "1.159509";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
92 chr18 Cufflinks exon 46452826 46452864 1000 . . gene_id "CUFF.124197"; transcript_id "CUFF.124197.1"; exon_number "1"; FPKM "48.7540899334"; frac "1.000000"; conf_lo "0.000000"; conf_hi "97.508180"; cov "2.769231";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
93 chr18 Cufflinks exon 50151390 50151416 1000 . . gene_id "CUFF.124439"; transcript_id "CUFF.124439.1"; exon_number "1"; FPKM "17.5638395629"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.733298"; cov "0.997626";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
94 chr18 Cufflinks exon 65106749 65106787 1000 . . gene_id "CUFF.125675"; transcript_id "CUFF.125675.1"; exon_number "1"; FPKM "48.7540899334"; frac "1.000000"; conf_lo "0.000000"; conf_hi "97.508180"; cov "2.769231";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
95 chr18 Cufflinks transcript 65202282 65202424 1000 . . gene_id "CUFF.125729"; transcript_id "CUFF.125729.1"; FPKM "13.2965699818"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.593140"; cov "0.755245";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
96 chr18 Cufflinks exon 69735254 69735280 1000 . . gene_id "CUFF.126371"; transcript_id "CUFF.126371.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
97 chr19 Cufflinks transcript 5370466 5370492 1000 . . gene_id "CUFF.129319"; transcript_id "CUFF.129319.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
98 chr19 Cufflinks exon 17633088 17633203 1000 . . gene_id "CUFF.131333"; transcript_id "CUFF.131333.1"; exon_number "1"; FPKM "20.4893265884"; frac "1.000000"; conf_lo "2.163116"; conf_hi "38.815537"; cov "1.163793";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
99 chr19 Cufflinks transcript 41997624 41997859 1000 . . gene_id "CUFF.133569"; transcript_id "CUFF.133569.1"; FPKM "28.1988698132"; frac "1.000000"; conf_lo "13.125940"; conf_hi "43.271800"; cov "1.601695";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
100 chr19 Cufflinks transcript 53311236 53311262 1000 . . gene_id "CUFF.134885"; transcript_id "CUFF.134885.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
101 chr19 Cufflinks exon 56516515 56516684 1000 . . gene_id "CUFF.135203"; transcript_id "CUFF.135203.1"; exon_number "1"; FPKM "33.5542854247"; frac "1.000000"; conf_lo "14.181710"; conf_hi "52.926861"; cov "1.905882";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
102 chr2 Cufflinks transcript 3246910 3246936 1000 . . gene_id "CUFF.136019"; transcript_id "CUFF.136019.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
103 chr2 Cufflinks transcript 4543774 4543977 1000 . . gene_id "CUFF.136435"; transcript_id "CUFF.136435.1"; FPKM "37.2825393608"; frac "1.000000"; conf_lo "18.641270"; conf_hi "55.923809"; cov "2.117647";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
104 chr2 Cufflinks exon 7271328 7271354 1000 . . gene_id "CUFF.137407"; transcript_id "CUFF.137407.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
105 chr2 Cufflinks exon 11509202 11509287 1000 . . gene_id "CUFF.137559"; transcript_id "CUFF.137559.1"; exon_number "1"; FPKM "22.1094128768"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.218826"; cov "1.255814";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
106 chr2 Cufflinks transcript 30200331 30200938 1000 . . gene_id "CUFF.140289"; transcript_id "CUFF.140289.1"; FPKM "100.0741846001"; frac "1.000000"; conf_lo "82.383401"; conf_hi "117.764968"; cov "5.684211";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
107 chr2 Cufflinks transcript 49559781 49559842 1000 . . gene_id "CUFF.143035"; transcript_id "CUFF.143035.1"; FPKM "15.3339476403"; frac "1.000000"; conf_lo "0.000000"; conf_hi "37.019424"; cov "0.870968";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
108 chr2 Cufflinks transcript 78736720 78736746 1000 . . gene_id "CUFF.146383"; transcript_id "CUFF.146383.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
109 chr2 Cufflinks transcript 97470595 97470703 1000 . . gene_id "CUFF.148117"; transcript_id "CUFF.148117.1"; FPKM "17.4441239211"; frac "1.000000"; conf_lo "0.000000"; conf_hi "34.888248"; cov "0.990826";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
110 chr2 Cufflinks transcript 106644220 106644341 1000 . . gene_id "CUFF.148977"; transcript_id "CUFF.148977.1"; FPKM "27.2743167045"; frac "1.000000"; conf_lo "6.656871"; conf_hi "47.891762"; cov "1.549180";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
111 chr2 Cufflinks transcript 118960859 118961004 1000 . . gene_id "CUFF.150015"; transcript_id "CUFF.150015.1"; FPKM "9.7675145928"; frac "1.000000"; conf_lo "0.000000"; conf_hi "21.046069"; cov "0.554795";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
112 chr2 Cufflinks exon 125388931 125389219 1000 . . gene_id "CUFF.151331"; transcript_id "CUFF.151331.1"; exon_number "1"; FPKM "23.0274507817"; frac "1.000000"; conf_lo "10.718761"; conf_hi "35.336141"; cov "1.307958";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
113 chr2 Cufflinks transcript 145141669 145141755 1000 . . gene_id "CUFF.153993"; transcript_id "CUFF.153993.1"; FPKM "10.9276408471"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.381659"; cov "0.620690";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
114 chr2 Cufflinks exon 178035510 178035611 1000 . . gene_id "CUFF.158329"; transcript_id "CUFF.158329.1"; exon_number "1"; FPKM "9.3206348402"; frac "1.000000"; conf_lo "0.000000"; conf_hi "22.502003"; cov "0.529412";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
115 chr2 Cufflinks transcript 181047445 181047471 1000 . . gene_id "CUFF.158989"; transcript_id "CUFF.158989.1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.816931"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
116 chr3 Cufflinks transcript 55664118 55664197 1000 . . gene_id "CUFF.163141"; transcript_id "CUFF.163141.1"; FPKM "11.8838094213"; frac "1.000000"; conf_lo "0.000000"; conf_hi "28.690054"; cov "0.675000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
117 chr3 Cufflinks exon 66896354 66896433 1000 . . gene_id "CUFF.163935"; transcript_id "CUFF.163935.1"; exon_number "1"; FPKM "5.9419047106"; frac "1.000000"; conf_lo "0.000000"; conf_hi "17.825714"; cov "0.337500";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
118 chr3 Cufflinks transcript 80648745 80648771 1000 . . gene_id "CUFF.164995"; transcript_id "CUFF.164995.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
119 chr3 Cufflinks exon 107424385 107424452 1000 . . gene_id "CUFF.169311"; transcript_id "CUFF.169311.1"; exon_number "1"; FPKM "13.9809522603"; frac "1.000000"; conf_lo "0.000000"; conf_hi "33.753005"; cov "0.794118";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
120 chr3 Cufflinks transcript 130936639 130936898 1000 . . gene_id "CUFF.171349"; transcript_id "CUFF.171349.1"; FPKM "20.1110620975"; frac "1.000000"; conf_lo "7.983635"; conf_hi "32.238489"; cov "1.142308";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
121 chr3 Cufflinks exon 136592671 136592771 1000 . . gene_id "CUFF.171861"; transcript_id "CUFF.171861.1"; exon_number "1"; FPKM "32.9452142371"; frac "1.000000"; conf_lo "8.040973"; conf_hi "57.849455"; cov "1.871287";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
122 chr3 Cufflinks transcript 152641383 152641451 1000 . . gene_id "CUFF.172987"; transcript_id "CUFF.172987.1"; FPKM "20.6674946457"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.532262"; cov "1.173913";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
123 chr3 Cufflinks transcript 152861374 152861508 1000 . . gene_id "CUFF.173007"; transcript_id "CUFF.173007.1"; FPKM "24.6479010219"; frac "1.000000"; conf_lo "6.015839"; conf_hi "43.279963"; cov "1.400000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
124 chr3 Cufflinks transcript 157698536 157698562 1000 . . gene_id "CUFF.173579"; transcript_id "CUFF.173579.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
125 chr4 Cufflinks exon 13715310 13715630 1000 . . gene_id "CUFF.174817"; transcript_id "CUFF.174817.1"; exon_number "1"; FPKM "19.2510308382"; frac "1.000000"; conf_lo "8.572480"; conf_hi "29.929581"; cov "1.093458";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
126 chr4 Cufflinks transcript 62063768 62063821 1000 . . gene_id "CUFF.179577"; transcript_id "CUFF.179577.1"; FPKM "26.3875633685"; frac "1.000000"; conf_lo "0.000000"; conf_hi "56.869362"; cov "1.498813";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
127 chr4 Cufflinks transcript 77180436 77180462 1000 . . gene_id "CUFF.181019"; transcript_id "CUFF.181019.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
128 chr4 Cufflinks transcript 102112070 102112096 1000 . . gene_id "CUFF.183381"; transcript_id "CUFF.183381.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
129 chr4 Cufflinks exon 117233771 117233830 1000 + . gene_id "CUFF.185373"; transcript_id "CUFF.185373.1"; exon_number "1"; FPKM "4.8015391601"; frac "1.000000"; conf_lo "0.000000"; conf_hi "14.404617"; cov "0.272727";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
130 chr4 Cufflinks exon 135563059 135563110 1000 . . gene_id "CUFF.189099"; transcript_id "CUFF.189099.1"; exon_number "1"; FPKM "18.2827837250"; frac "1.000000"; conf_lo "0.000000"; conf_hi "44.138544"; cov "1.038462";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
131 chr4 Cufflinks exon 147515029 147515097 1000 . . gene_id "CUFF.190627"; transcript_id "CUFF.190627.1"; exon_number "1"; FPKM "34.4458244094"; frac "1.000000"; conf_lo "3.636542"; conf_hi "65.255106"; cov "1.956522";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
132 chr5 Cufflinks exon 3949522 3949685 1000 . . gene_id "CUFF.192485"; transcript_id "CUFF.192485.1"; exon_number "1"; FPKM "23.1879208220"; frac "1.000000"; conf_lo "6.791585"; conf_hi "39.584257"; cov "1.317073";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
133 chr5 Cufflinks exon 22635516 22635542 1000 . . gene_id "CUFF.194445"; transcript_id "CUFF.194445.1"; exon_number "1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
134 chr5 Cufflinks exon 34172212 34172238 1000 . . gene_id "CUFF.196463"; transcript_id "CUFF.196463.1"; exon_number "1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.816931"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
135 chr5 Cufflinks transcript 35362816 35362905 1000 . . gene_id "CUFF.196905"; transcript_id "CUFF.196905.1"; FPKM "10.5633861522"; frac "1.000000"; conf_lo "0.000000"; conf_hi "25.502270"; cov "0.600000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
136 chr5 Cufflinks transcript 37083127 37083166 1000 . . gene_id "CUFF.197139"; transcript_id "CUFF.197139.1"; FPKM "23.7676188425"; frac "1.000000"; conf_lo "0.000000"; conf_hi "57.380108"; cov "1.350000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
137 chr5 Cufflinks transcript 68089694 68089831 1000 . . gene_id "CUFF.199409"; transcript_id "CUFF.199409.1"; FPKM "17.2229122047"; frac "1.000000"; conf_lo "1.818271"; conf_hi "32.627553"; cov "0.978261";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
138 chr5 Cufflinks exon 98615179 98615254 1000 . . gene_id "CUFF.201693"; transcript_id "CUFF.201693.1"; exon_number "1"; FPKM "12.5092730750"; frac "1.000000"; conf_lo "0.000000"; conf_hi "30.200057"; cov "0.710526";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
139 chr5 Cufflinks exon 105915104 105915181 1000 . . gene_id "CUFF.202385"; transcript_id "CUFF.202385.1"; exon_number "1"; FPKM "12.1885224833"; frac "1.000000"; conf_lo "0.000000"; conf_hi "29.425696"; cov "0.692308";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
140 chr5 Cufflinks transcript 116136788 116136814 1000 . . gene_id "CUFF.204349"; transcript_id "CUFF.204349.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
141 chr5 Cufflinks exon 122819526 122819619 1000 . . gene_id "CUFF.205487"; transcript_id "CUFF.205487.1"; exon_number "1"; FPKM "25.2486782797"; frac "1.000000"; conf_lo "2.649470"; conf_hi "47.847887"; cov "1.434124";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
142 chr5 Cufflinks exon 132055557 132055583 1000 . . gene_id "CUFF.207163"; transcript_id "CUFF.207163.1"; exon_number "1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
143 chr5 Cufflinks transcript 145619548 145619710 1000 . . gene_id "CUFF.209965"; transcript_id "CUFF.209965.1"; FPKM "40.8278115086"; frac "1.000000"; conf_lo "19.004428"; conf_hi "62.651195"; cov "2.319018";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
144 chr6 Cufflinks exon 48466822 48466848 1000 . . gene_id "CUFF.215907"; transcript_id "CUFF.215907.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
145 chr6 Cufflinks exon 63803818 63803844 1000 . . gene_id "CUFF.217337"; transcript_id "CUFF.217337.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
146 chr6 Cufflinks transcript 77393088 77393138 1000 . . gene_id "CUFF.218387"; transcript_id "CUFF.218387.1"; FPKM "18.6412696804"; frac "1.000000"; conf_lo "0.000000"; conf_hi "45.004006"; cov "1.058824";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
147 chr6 Cufflinks transcript 82379452 82379478 1000 . . gene_id "CUFF.218947"; transcript_id "CUFF.218947.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
148 chr6 Cufflinks exon 83928984 83929105 1000 . . gene_id "CUFF.219317"; transcript_id "CUFF.219317.1"; exon_number "1"; FPKM "46.7559714935"; frac "1.000000"; conf_lo "19.761399"; conf_hi "73.750544"; cov "2.655738";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
149 chr6 Cufflinks exon 103658447 103658521 1000 . . gene_id "CUFF.221849"; transcript_id "CUFF.221849.1"; exon_number "1"; FPKM "19.0140950740"; frac "1.000000"; conf_lo "0.000000"; conf_hi "40.969681"; cov "1.080000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
150 chr6 Cufflinks exon 113781332 113781358 1000 . . gene_id "CUFF.222775"; transcript_id "CUFF.222775.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
151 chr6 Cufflinks exon 118857949 118858148 1000 . . gene_id "CUFF.223543"; transcript_id "CUFF.223543.1"; exon_number "1"; FPKM "19.0140950740"; frac "1.000000"; conf_lo "5.569100"; conf_hi "32.459091"; cov "1.080000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
152 chr6 Cufflinks transcript 124996314 124996340 1000 . . gene_id "CUFF.224545"; transcript_id "CUFF.224545.1"; FPKM "17.6056435870"; frac "1.000000"; conf_lo "0.000000"; conf_hi "52.816931"; cov "1.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
153 chr6 Cufflinks transcript 127077329 127077364 1000 . . gene_id "CUFF.225409"; transcript_id "CUFF.225409.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "105.633862"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
154 chr6 Cufflinks exon 136038245 136038304 1000 . . gene_id "CUFF.225521"; transcript_id "CUFF.225521.1"; exon_number "1"; FPKM "23.7676188425"; frac "1.000000"; conf_lo "0.000000"; conf_hi "51.212101"; cov "1.350000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
155 chr7 Cufflinks exon 13845893 13845919 1000 . . gene_id "CUFF.227869"; transcript_id "CUFF.227869.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
156 chr7 Cufflinks exon 56060938 56061023 1000 . . gene_id "CUFF.232920"; transcript_id "CUFF.232920.1"; exon_number "1"; FPKM "11.0547064384"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.688422"; cov "0.627907";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
157 chr7 Cufflinks exon 71484947 71484992 1000 . . gene_id "CUFF.234766"; transcript_id "CUFF.234766.1"; exon_number "1"; FPKM "20.6674946457"; frac "1.000000"; conf_lo "0.000000"; conf_hi "49.895746"; cov "1.173913";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
158 chr7 Cufflinks transcript 71784522 71784548 1000 . . gene_id "CUFF.234810"; transcript_id "CUFF.234810.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
159 chr7 Cufflinks exon 72605044 72605070 1000 . . gene_id "CUFF.234948"; transcript_id "CUFF.234948.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
160 chr7 Cufflinks transcript 85554210 85554343 1000 . . gene_id "CUFF.235778"; transcript_id "CUFF.235778.1"; FPKM "17.7370289869"; frac "1.000000"; conf_lo "1.872548"; conf_hi "33.601510"; cov "1.007463";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
161 chr7 Cufflinks transcript 98723325 98723416 1000 . . gene_id "CUFF.237594"; transcript_id "CUFF.237594.1"; FPKM "10.3337473228"; frac "1.000000"; conf_lo "0.000000"; conf_hi "24.947873"; cov "0.586957";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
162 chr7 Cufflinks exon 104055491 104055589 1000 . . gene_id "CUFF.238474"; transcript_id "CUFF.238474.1"; exon_number "1"; FPKM "28.8092349606"; frac "1.000000"; conf_lo "5.286593"; conf_hi "52.331877"; cov "1.636364";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
163 chr7 Cufflinks exon 107603711 107603748 1000 . . gene_id "CUFF.239180"; transcript_id "CUFF.239180.1"; exon_number "1"; FPKM "25.0185461500"; frac "1.000000"; conf_lo "0.000000"; conf_hi "60.400113"; cov "1.421053";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
164 chr7 Cufflinks exon 133792511 133792572 1000 . . gene_id "CUFF.242136"; transcript_id "CUFF.242136.1"; exon_number "1"; FPKM "15.3339476403"; frac "1.000000"; conf_lo "0.000000"; conf_hi "37.019424"; cov "0.870968";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
165 chr8 Cufflinks exon 9970398 9970545 1000 . . gene_id "CUFF.245320"; transcript_id "CUFF.245320.1"; exon_number "1"; FPKM "22.4828826889"; frac "1.000000"; conf_lo "5.487421"; conf_hi "39.478345"; cov "1.277027";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
166 chr8 Cufflinks transcript 10425062 10425088 1000 . . gene_id "CUFF.245408"; transcript_id "CUFF.245408.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
167 chr8 Cufflinks transcript 13018897 13018981 1000 . . gene_id "CUFF.245840"; transcript_id "CUFF.245840.1"; FPKM "16.7771427124"; frac "1.000000"; conf_lo "0.000000"; conf_hi "36.149718"; cov "0.952941";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
168 chr8 Cufflinks transcript 14745123 14745149 1000 . . gene_id "CUFF.246146"; transcript_id "CUFF.246146.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
169 chr8 Cufflinks exon 29820895 29820930 1000 . . gene_id "CUFF.247504"; transcript_id "CUFF.247504.1"; exon_number "1"; FPKM "26.4084653806"; frac "1.000000"; conf_lo "0.000000"; conf_hi "63.755675"; cov "1.500000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
170 chr8 Cufflinks transcript 36676568 36676665 1000 . . gene_id "CUFF.248480"; transcript_id "CUFF.248480.1"; FPKM "9.7010689153"; frac "1.000000"; conf_lo "0.000000"; conf_hi "23.420452"; cov "0.551020";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
171 chr8 Cufflinks transcript 50146533 50146584 1000 . . gene_id "CUFF.249617"; transcript_id "CUFF.249617.1"; FPKM "27.4241755875"; frac "1.000000"; conf_lo "0.000000"; conf_hi "59.090886"; cov "1.557692";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
172 chr8 Cufflinks exon 51010775 51010850 1000 . . gene_id "CUFF.249695"; transcript_id "CUFF.249695.1"; exon_number "1"; FPKM "18.7639096125"; frac "1.000000"; conf_lo "0.000000"; conf_hi "40.430606"; cov "1.065789";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
173 chr8 Cufflinks exon 63391023 63391095 1000 . . gene_id "CUFF.250329"; transcript_id "CUFF.250329.1"; exon_number "1"; FPKM "13.0233527904"; frac "1.000000"; conf_lo "0.000000"; conf_hi "31.441155"; cov "0.739726";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
174 chr8 Cufflinks transcript 73858591 73858706 1000 . . gene_id "CUFF.251697"; transcript_id "CUFF.251697.1"; FPKM "12.2935959530"; frac "1.000000"; conf_lo "0.000000"; conf_hi "26.489018"; cov "0.698276";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
175 chr8 Cufflinks transcript 75514699 75514725 1000 . . gene_id "CUFF.252263"; transcript_id "CUFF.252263.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
176 chr8 Cufflinks exon 86101515 86101548 1000 . . gene_id "CUFF.252891"; transcript_id "CUFF.252891.1"; exon_number "1"; FPKM "27.9619045206"; frac "1.000000"; conf_lo "0.000000"; conf_hi "67.506009"; cov "1.588235";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
177 chr8 Cufflinks transcript 93627215 93627241 1000 . . gene_id "CUFF.254225"; transcript_id "CUFF.254225.1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
178 chr8 Cufflinks exon 108148187 108148357 1000 . . gene_id "CUFF.255477"; transcript_id "CUFF.255477.1"; exon_number "1"; FPKM "11.1193538445"; frac "1.000000"; conf_lo "0.000000"; conf_hi "22.238708"; cov "0.631579";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
179 chr8 Cufflinks exon 108190587 108190664 1000 . . gene_id "CUFF.255507"; transcript_id "CUFF.255507.1"; exon_number "1"; FPKM "12.1885224833"; frac "1.000000"; conf_lo "0.000000"; conf_hi "29.425696"; cov "0.692308";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
180 chr8 Cufflinks exon 120931685 120931769 1000 . . gene_id "CUFF.257375"; transcript_id "CUFF.257375.1"; exon_number "1"; FPKM "16.7771427124"; frac "1.000000"; conf_lo "0.000000"; conf_hi "36.149718"; cov "0.952941";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
181 chr9 Cufflinks transcript 20449846 20449932 1000 . . gene_id "CUFF.260747"; transcript_id "CUFF.260747.1"; FPKM "234.9313045507"; frac "1.000000"; conf_lo "163.275950"; conf_hi "306.586659"; cov "13.344091";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
182 chr9 Cufflinks exon 25083606 25083643 1000 . . gene_id "CUFF.261551"; transcript_id "CUFF.261551.1"; exon_number "1"; FPKM "25.0185461500"; frac "1.000000"; conf_lo "0.000000"; conf_hi "60.400113"; cov "1.421053";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
183 chr9 Cufflinks transcript 27906894 27906964 1000 . . gene_id "CUFF.261925"; transcript_id "CUFF.261925.1"; FPKM "26.7804155972"; frac "1.000000"; conf_lo "0.000000"; conf_hi "53.560831"; cov "1.521127";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
184 chr9 Cufflinks transcript 34418034 34418065 1000 . . gene_id "CUFF.262975"; transcript_id "CUFF.262975.1"; FPKM "29.7095235531"; frac "1.000000"; conf_lo "0.000000"; conf_hi "71.725135"; cov "1.687500";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
185 chr9 Cufflinks exon 34710789 34710815 1000 . . gene_id "CUFF.263065"; transcript_id "CUFF.263065.1"; exon_number "1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
186 chr9 Cufflinks transcript 40823051 40823090 1000 . . gene_id "CUFF.263747"; transcript_id "CUFF.263747.1"; FPKM "23.7676188425"; frac "1.000000"; conf_lo "0.000000"; conf_hi "57.380108"; cov "1.350000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
187 chr9 Cufflinks exon 59236547 59236671 1000 . . gene_id "CUFF.267045"; transcript_id "CUFF.267045.1"; exon_number "1"; FPKM "12.1905895442"; frac "1.000000"; conf_lo "0.000000"; conf_hi "25.808020"; cov "0.692425";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
188 chr9 Cufflinks transcript 66418162 66418188 1000 . . gene_id "CUFF.268423"; transcript_id "CUFF.268423.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
189 chr9 Cufflinks transcript 95913236 95913262 1000 . . gene_id "CUFF.270957"; transcript_id "CUFF.270957.1"; FPKM "35.2112871741"; frac "1.000000"; conf_lo "0.000000"; conf_hi "85.007567"; cov "2.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
190 chr9 Cufflinks exon 103101949 103102030 1000 . . gene_id "CUFF.271979"; transcript_id "CUFF.271979.1"; exon_number "1"; FPKM "11.5939604110"; frac "1.000000"; conf_lo "0.000000"; conf_hi "27.990296"; cov "0.658537";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
191 chr9 Cufflinks transcript 105579135 105579173 1000 . . gene_id "CUFF.272347"; transcript_id "CUFF.272347.1"; FPKM "24.3770449667"; frac "1.000000"; conf_lo "0.000000"; conf_hi "58.851393"; cov "1.384615";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
192 chr9 Cufflinks exon 107445870 107445930 1000 . . gene_id "CUFF.272761"; transcript_id "CUFF.272761.1"; exon_number "1"; FPKM "38.9633095779"; frac "1.000000"; conf_lo "4.113466"; conf_hi "73.813153"; cov "2.213115";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
193 chr9 Cufflinks exon 113779194 113779220 1000 . . gene_id "CUFF.274445"; transcript_id "CUFF.274445.1"; exon_number "1"; FPKM "52.8169307611"; frac "1.000000"; conf_lo "0.000000"; conf_hi "113.804669"; cov "3.000000";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
194 chr9 Cufflinks transcript 120860476 120860606 1000 . . gene_id "CUFF.275115"; transcript_id "CUFF.275115.1"; FPKM "25.4005086867"; frac "1.000000"; conf_lo "6.199529"; conf_hi "44.601488"; cov "1.442748";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
195 chrX Cufflinks exon 10274057 10274087 1000 . . gene_id "CUFF.276147"; transcript_id "CUFF.276147.1"; exon_number "1"; FPKM "99.5432248142"; frac "1.000000"; conf_lo "21.405127"; conf_hi "177.681323"; cov "5.654052";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
196 chrX Cufflinks transcript 39881431 39881678 1000 . . gene_id "CUFF.277419"; transcript_id "CUFF.277419.1"; FPKM "42.1683560109"; frac "1.000000"; conf_lo "24.187709"; conf_hi "60.149003"; cov "2.395161";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
197 chrX Cufflinks transcript 90114645 90131913 1000 - . gene_id "CUFF.279771"; transcript_id "CUFF.279771.1"; FPKM "6.8891648819"; frac "1.000000"; conf_lo "0.000000"; conf_hi "20.667495"; cov "0.391304";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
198 chrX Cufflinks transcript 148249672 148249713 1000 . . gene_id "CUFF.282847"; transcript_id "CUFF.282847.1"; FPKM "56.5895686726"; frac "1.000000"; conf_lo "5.974320"; conf_hi "107.204818"; cov "3.214286";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
199 chrX Cufflinks transcript 148481505 148482455 1000 + . gene_id "CUFF.282965"; transcript_id "CUFF.282965.1"; FPKM "40.1706233958"; frac "1.000000"; conf_lo "16.978103"; conf_hi "63.363144"; cov "2.281690";
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
200 chrX Cufflinks transcript 158986411 158986471 1000 . . gene_id "CUFF.283831"; transcript_id "CUFF.283831.1"; FPKM "15.5853238312"; frac "1.000000"; conf_lo "0.000000"; conf_hi "37.626300"; cov "0.885246";