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annotate annotation.xml @ 35:fa736576c7ed draft

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author jjkoehorst
date Mon, 04 Jul 2016 10:37:59 -0400
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35
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1 <tool id="DAnnotation" name="Protein annotation" version="0.1">
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2 <description>SAPP - Protein annotation module</description>
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3 <requirements>
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4 <container type="docker">jjkoehorst/sappdocker:PROTEINANNOTATION</container>
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5 </requirements>
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6 <command interpreter="docker">java -jar /proteinannotation/proteinAnnotation-0.0.1-SNAPSHOT-jar-with-dependencies.jar '-input' '$input' '-output' '$output' -format TURTLE</command>
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7 <inputs>
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8 <param format="ttl" label="genome ttl file" name="input" type="data"/>
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9 </inputs>
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10 <outputs>
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11 <data format="ttl" label="Annotation: ${input.name}" name="output"/>
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12 </outputs>
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13 </tool>