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comparison fasta2rdf/fastatordf.xml @ 12:0773b11fb822

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cutadapters added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:56:49 +0100
parents ec73c34af97b
children
comparison
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11:a712b378e090 12:0773b11fb822
1 <tool id="SAPP_genome_to_ttl" name="FASTA to RDF" version="0.1"> 1 <tool id="SAPP_genome_to_ttl" name="FASTA to RDF" version="0.1">
2 <requirements>
3 <requirement type='package' version="3.4">python</requirement>
4 <requirement type='package' version="1.0">rdflib</requirement>
5 </requirements>
2 <description></description> 6 <description></description>
3 <command interpreter="python3">fastatordf.py '-input' '$input' '-output' '$output' '-organism' '$organism' '-ncbi_taxid' '$ncbi_taxid' '-idtag' '$identification_tag' -sourcedb SAPP 7 <command interpreter="python3">fastatordf.py '-input' '$input' '-output' '$output' '-organism' '$organism' '-ncbi_taxid' '$ncbi_taxid' '-idtag' '$identification_tag' -sourcedb SAPP
4 #for $index, $id in enumerate( $ids ) 8 #for $index, $id in enumerate( $ids )
5 '-ids' '$id.id_tag' 9 '-ids' '$id.id_tag'
6 #end for 10 #end for