diff rnaseq/cutadapt/test-data/cca_out2.pdf @ 11:a712b378e090

cutadapt added

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rnaseq/cutadapt/test-data/cca_out2.pdf	Sat Feb 21 16:33:42 2015 +0100
@@ -0,0 +1,858 @@
+%PDF-1.4
+%���ρ�\r
+1 0 obj
+<<
+/CreationDate (D:20110308102929)
+/ModDate (D:20110308102929)
+/Title (R Graphics Output)
+/Producer (R 2.11.0)
+/Creator (R)
+>>
+endobj
+2 0 obj
+<<
+/Type /Catalog
+/Pages 3 0 R
+>>
+endobj
+5 0 obj
+<<
+/Type /Page
+/Parent 3 0 R
+/Contents 6 0 R
+/Resources 4 0 R
+>>
+endobj
+6 0 obj
+<<
+/Length 7 0 R
+>>
+stream
+1 J 1 j q
+Q q 59.04 73.44 486.72 443.52 re W n
+0.000 0.000 0.000 RG
+0.75 w
+[] 0 d
+1 J
+1 j
+10.00 M
+302.40 110.40 m
+302.40 480.00 l
+S
+302.40 356.80 m
+306.64 356.68 l
+310.87 356.31 l
+315.07 355.71 l
+319.21 354.86 l
+323.29 353.79 l
+327.29 352.47 l
+331.18 350.94 l
+334.97 349.18 l
+338.62 347.21 l
+342.13 345.04 l
+345.49 342.66 l
+348.68 340.10 l
+351.68 337.37 l
+354.49 334.47 l
+357.09 331.41 l
+359.48 328.21 l
+361.64 324.88 l
+363.57 321.43 l
+365.25 317.88 l
+366.69 314.24 l
+367.88 310.52 l
+368.80 306.74 l
+369.47 302.92 l
+369.87 299.07 l
+370.00 295.20 l
+369.87 291.33 l
+369.47 287.48 l
+368.80 283.66 l
+367.88 279.88 l
+366.69 276.16 l
+365.25 272.52 l
+363.57 268.97 l
+361.64 265.52 l
+359.48 262.19 l
+357.09 258.99 l
+354.49 255.93 l
+351.68 253.03 l
+348.68 250.30 l
+345.49 247.74 l
+342.13 245.36 l
+338.62 243.19 l
+334.97 241.22 l
+331.18 239.46 l
+327.29 237.93 l
+323.29 236.61 l
+319.21 235.54 l
+315.07 234.69 l
+310.87 234.09 l
+306.64 233.72 l
+302.40 233.60 l
+298.16 233.72 l
+293.93 234.09 l
+289.73 234.69 l
+285.59 235.54 l
+281.51 236.61 l
+277.51 237.93 l
+273.62 239.46 l
+269.83 241.22 l
+266.18 243.19 l
+262.67 245.36 l
+259.31 247.74 l
+256.12 250.30 l
+253.12 253.03 l
+250.31 255.93 l
+247.71 258.99 l
+245.32 262.19 l
+243.16 265.52 l
+241.23 268.97 l
+239.55 272.52 l
+238.11 276.16 l
+236.92 279.88 l
+236.00 283.66 l
+235.33 287.48 l
+234.93 291.33 l
+234.80 295.20 l
+234.93 299.07 l
+235.33 302.92 l
+236.00 306.74 l
+236.92 310.52 l
+238.11 314.24 l
+239.55 317.88 l
+241.23 321.43 l
+243.16 324.88 l
+245.32 328.21 l
+247.71 331.41 l
+250.31 334.47 l
+253.12 337.37 l
+256.12 340.10 l
+259.31 342.66 l
+262.67 345.04 l
+266.18 347.21 l
+269.83 349.18 l
+273.62 350.94 l
+277.51 352.47 l
+281.51 353.79 l
+285.59 354.86 l
+289.73 355.71 l
+293.93 356.31 l
+298.16 356.68 l
+302.40 356.80 l
+S
+0.75 w
+[ 0.00 4.00] 0 d
+302.40 315.73 m
+303.81 315.69 l
+305.22 315.57 l
+306.62 315.37 l
+308.00 315.09 l
+309.36 314.73 l
+310.70 314.29 l
+311.99 313.78 l
+313.26 313.19 l
+314.47 312.54 l
+315.64 311.81 l
+316.76 311.02 l
+317.83 310.17 l
+318.83 309.26 l
+319.76 308.29 l
+320.63 307.27 l
+321.43 306.20 l
+322.15 305.09 l
+322.79 303.94 l
+323.35 302.76 l
+323.83 301.55 l
+324.23 300.31 l
+324.53 299.05 l
+324.76 297.77 l
+324.89 296.49 l
+324.93 295.20 l
+324.89 293.91 l
+324.76 292.63 l
+324.53 291.35 l
+324.23 290.09 l
+323.83 288.85 l
+323.35 287.64 l
+322.79 286.46 l
+322.15 285.31 l
+321.43 284.20 l
+320.63 283.13 l
+319.76 282.11 l
+318.83 281.14 l
+317.83 280.23 l
+316.76 279.38 l
+315.64 278.59 l
+314.47 277.86 l
+313.26 277.21 l
+311.99 276.62 l
+310.70 276.11 l
+309.36 275.67 l
+308.00 275.31 l
+306.62 275.03 l
+305.22 274.83 l
+303.81 274.71 l
+302.40 274.67 l
+300.99 274.71 l
+299.58 274.83 l
+298.18 275.03 l
+296.80 275.31 l
+295.44 275.67 l
+294.10 276.11 l
+292.81 276.62 l
+291.54 277.21 l
+290.33 277.86 l
+289.16 278.59 l
+288.04 279.38 l
+286.97 280.23 l
+285.97 281.14 l
+285.04 282.11 l
+284.17 283.13 l
+283.37 284.20 l
+282.65 285.31 l
+282.01 286.46 l
+281.45 287.64 l
+280.97 288.85 l
+280.57 290.09 l
+280.27 291.35 l
+280.04 292.63 l
+279.91 293.91 l
+279.87 295.20 l
+279.91 296.49 l
+280.04 297.77 l
+280.27 299.05 l
+280.57 300.31 l
+280.97 301.55 l
+281.45 302.76 l
+282.01 303.94 l
+282.65 305.09 l
+283.37 306.20 l
+284.17 307.27 l
+285.04 308.29 l
+285.97 309.26 l
+286.97 310.17 l
+288.04 311.02 l
+289.16 311.81 l
+290.33 312.54 l
+291.54 313.19 l
+292.81 313.78 l
+294.10 314.29 l
+295.44 314.73 l
+296.80 315.09 l
+298.18 315.37 l
+299.58 315.57 l
+300.99 315.69 l
+302.40 315.73 l
+S
+302.40 397.87 m
+309.47 397.66 l
+316.52 397.06 l
+323.51 396.05 l
+330.42 394.64 l
+337.22 392.84 l
+343.88 390.66 l
+350.37 388.10 l
+356.68 385.17 l
+362.77 381.88 l
+368.62 378.26 l
+374.22 374.31 l
+379.53 370.04 l
+384.53 365.48 l
+389.21 360.64 l
+393.55 355.55 l
+397.53 350.21 l
+401.13 344.66 l
+404.34 338.91 l
+407.15 332.99 l
+409.55 326.93 l
+411.53 320.73 l
+413.07 314.44 l
+414.18 308.07 l
+414.84 301.65 l
+415.07 295.20 l
+414.84 288.75 l
+414.18 282.33 l
+413.07 275.96 l
+411.53 269.67 l
+409.55 263.47 l
+407.15 257.41 l
+404.34 251.49 l
+401.13 245.74 l
+397.53 240.19 l
+393.55 234.85 l
+389.21 229.76 l
+384.53 224.92 l
+379.53 220.36 l
+374.22 216.09 l
+368.62 212.14 l
+362.77 208.52 l
+356.68 205.23 l
+350.37 202.30 l
+343.88 199.74 l
+337.22 197.56 l
+330.42 195.76 l
+323.51 194.35 l
+316.52 193.34 l
+309.47 192.74 l
+302.40 192.53 l
+295.33 192.74 l
+288.28 193.34 l
+281.29 194.35 l
+274.38 195.76 l
+267.58 197.56 l
+260.92 199.74 l
+254.43 202.30 l
+248.12 205.23 l
+242.03 208.52 l
+236.18 212.14 l
+230.58 216.09 l
+225.27 220.36 l
+220.27 224.92 l
+215.59 229.76 l
+211.25 234.85 l
+207.27 240.19 l
+203.67 245.74 l
+200.46 251.49 l
+197.65 257.41 l
+195.25 263.47 l
+193.27 269.67 l
+191.73 275.96 l
+190.62 282.33 l
+189.96 288.75 l
+189.73 295.20 l
+189.96 301.65 l
+190.62 308.07 l
+191.73 314.44 l
+193.27 320.73 l
+195.25 326.93 l
+197.65 332.99 l
+200.46 338.91 l
+203.67 344.66 l
+207.27 350.21 l
+211.25 355.55 l
+215.59 360.64 l
+220.27 365.48 l
+225.27 370.04 l
+230.58 374.31 l
+236.18 378.26 l
+242.03 381.88 l
+248.12 385.17 l
+254.43 388.10 l
+260.92 390.66 l
+267.58 392.84 l
+274.38 394.64 l
+281.29 396.05 l
+288.28 397.06 l
+295.33 397.66 l
+302.40 397.87 l
+S
+BT
+0.000 0.000 0.000 rg
+/F2 1 Tf 18.00 0.00 -0.00 18.00 144.39 483.94 Tm [(X V) 70 (ar) -15 (iab) 20 (les)] TJ
+ET
+BT
+/F2 1 Tf 18.00 0.00 -0.00 18.00 369.72 483.94 Tm [(Y V) 70 (ar) -15 (iab) 20 (les)] TJ
+ET
+0.75 w
+[] 0 d
+  239.55 319.19 m
+  201.34 339.30 l
+  209.96 352.91 l
+  248.17 332.81 l
+b
+BT
+/F2 1 Tf 10.39 -6.00 6.00 10.39 175.46 355.52 Tm (c3) Tj
+ET
+  248.17 257.59 m
+  215.62 240.47 l
+  206.99 254.08 l
+  239.55 271.21 l
+b
+BT
+/F2 1 Tf 10.39 6.00 -6.00 10.39 178.33 229.91 Tm (c4) Tj
+ET
+  356.63 332.81 m
+  390.31 350.52 l
+  398.93 336.91 l
+  365.25 319.19 l
+b
+BT
+/F2 1 Tf 10.39 6.00 -6.00 10.39 418.37 349.18 Tm (c1) Tj
+ET
+  365.25 271.21 m
+  373.87 266.67 l
+  365.24 253.06 l
+  356.63 257.59 l
+b
+BT
+/F2 1 Tf 10.39 -6.00 6.00 10.39 415.49 236.25 Tm (c2) Tj
+ET
+Q q
+BT
+0.000 0.000 0.000 rg
+/F3 1 Tf 14.00 0.00 -0.00 14.00 209.98 541.45 Tm [(Explained V) 60 (ariance f) 20 (or CV 1)] TJ
+ET
+BT
+/F2 1 Tf 12.00 0.00 -0.00 12.00 252.04 4.32 Tm [(Canonical V) 70 (ar) -15 (iate1)] TJ
+ET
+Q
+endstream
+endobj
+7 0 obj
+6000
+endobj
+8 0 obj
+<<
+/Type /Page
+/Parent 3 0 R
+/Contents 9 0 R
+/Resources 4 0 R
+>>
+endobj
+9 0 obj
+<<
+/Length 10 0 R
+>>
+stream
+1 J 1 j q
+Q q 59.04 73.44 486.72 443.52 re W n
+Q q 59.04 73.44 486.72 443.52 re W n
+0.000 0.000 0.000 RG
+0.75 w
+[] 0 d
+1 J
+1 j
+10.00 M
+302.40 110.40 m
+302.40 480.00 l
+S
+302.40 356.80 m
+306.64 356.68 l
+310.87 356.31 l
+315.07 355.71 l
+319.21 354.86 l
+323.29 353.79 l
+327.29 352.47 l
+331.18 350.94 l
+334.97 349.18 l
+338.62 347.21 l
+342.13 345.04 l
+345.49 342.66 l
+348.68 340.10 l
+351.68 337.37 l
+354.49 334.47 l
+357.09 331.41 l
+359.48 328.21 l
+361.64 324.88 l
+363.57 321.43 l
+365.25 317.88 l
+366.69 314.24 l
+367.88 310.52 l
+368.80 306.74 l
+369.47 302.92 l
+369.87 299.07 l
+370.00 295.20 l
+369.87 291.33 l
+369.47 287.48 l
+368.80 283.66 l
+367.88 279.88 l
+366.69 276.16 l
+365.25 272.52 l
+363.57 268.97 l
+361.64 265.52 l
+359.48 262.19 l
+357.09 258.99 l
+354.49 255.93 l
+351.68 253.03 l
+348.68 250.30 l
+345.49 247.74 l
+342.13 245.36 l
+338.62 243.19 l
+334.97 241.22 l
+331.18 239.46 l
+327.29 237.93 l
+323.29 236.61 l
+319.21 235.54 l
+315.07 234.69 l
+310.87 234.09 l
+306.64 233.72 l
+302.40 233.60 l
+298.16 233.72 l
+293.93 234.09 l
+289.73 234.69 l
+285.59 235.54 l
+281.51 236.61 l
+277.51 237.93 l
+273.62 239.46 l
+269.83 241.22 l
+266.18 243.19 l
+262.67 245.36 l
+259.31 247.74 l
+256.12 250.30 l
+253.12 253.03 l
+250.31 255.93 l
+247.71 258.99 l
+245.32 262.19 l
+243.16 265.52 l
+241.23 268.97 l
+239.55 272.52 l
+238.11 276.16 l
+236.92 279.88 l
+236.00 283.66 l
+235.33 287.48 l
+234.93 291.33 l
+234.80 295.20 l
+234.93 299.07 l
+235.33 302.92 l
+236.00 306.74 l
+236.92 310.52 l
+238.11 314.24 l
+239.55 317.88 l
+241.23 321.43 l
+243.16 324.88 l
+245.32 328.21 l
+247.71 331.41 l
+250.31 334.47 l
+253.12 337.37 l
+256.12 340.10 l
+259.31 342.66 l
+262.67 345.04 l
+266.18 347.21 l
+269.83 349.18 l
+273.62 350.94 l
+277.51 352.47 l
+281.51 353.79 l
+285.59 354.86 l
+289.73 355.71 l
+293.93 356.31 l
+298.16 356.68 l
+302.40 356.80 l
+S
+0.75 w
+[ 0.00 4.00] 0 d
+302.40 315.73 m
+303.81 315.69 l
+305.22 315.57 l
+306.62 315.37 l
+308.00 315.09 l
+309.36 314.73 l
+310.70 314.29 l
+311.99 313.78 l
+313.26 313.19 l
+314.47 312.54 l
+315.64 311.81 l
+316.76 311.02 l
+317.83 310.17 l
+318.83 309.26 l
+319.76 308.29 l
+320.63 307.27 l
+321.43 306.20 l
+322.15 305.09 l
+322.79 303.94 l
+323.35 302.76 l
+323.83 301.55 l
+324.23 300.31 l
+324.53 299.05 l
+324.76 297.77 l
+324.89 296.49 l
+324.93 295.20 l
+324.89 293.91 l
+324.76 292.63 l
+324.53 291.35 l
+324.23 290.09 l
+323.83 288.85 l
+323.35 287.64 l
+322.79 286.46 l
+322.15 285.31 l
+321.43 284.20 l
+320.63 283.13 l
+319.76 282.11 l
+318.83 281.14 l
+317.83 280.23 l
+316.76 279.38 l
+315.64 278.59 l
+314.47 277.86 l
+313.26 277.21 l
+311.99 276.62 l
+310.70 276.11 l
+309.36 275.67 l
+308.00 275.31 l
+306.62 275.03 l
+305.22 274.83 l
+303.81 274.71 l
+302.40 274.67 l
+300.99 274.71 l
+299.58 274.83 l
+298.18 275.03 l
+296.80 275.31 l
+295.44 275.67 l
+294.10 276.11 l
+292.81 276.62 l
+291.54 277.21 l
+290.33 277.86 l
+289.16 278.59 l
+288.04 279.38 l
+286.97 280.23 l
+285.97 281.14 l
+285.04 282.11 l
+284.17 283.13 l
+283.37 284.20 l
+282.65 285.31 l
+282.01 286.46 l
+281.45 287.64 l
+280.97 288.85 l
+280.57 290.09 l
+280.27 291.35 l
+280.04 292.63 l
+279.91 293.91 l
+279.87 295.20 l
+279.91 296.49 l
+280.04 297.77 l
+280.27 299.05 l
+280.57 300.31 l
+280.97 301.55 l
+281.45 302.76 l
+282.01 303.94 l
+282.65 305.09 l
+283.37 306.20 l
+284.17 307.27 l
+285.04 308.29 l
+285.97 309.26 l
+286.97 310.17 l
+288.04 311.02 l
+289.16 311.81 l
+290.33 312.54 l
+291.54 313.19 l
+292.81 313.78 l
+294.10 314.29 l
+295.44 314.73 l
+296.80 315.09 l
+298.18 315.37 l
+299.58 315.57 l
+300.99 315.69 l
+302.40 315.73 l
+S
+302.40 397.87 m
+309.47 397.66 l
+316.52 397.06 l
+323.51 396.05 l
+330.42 394.64 l
+337.22 392.84 l
+343.88 390.66 l
+350.37 388.10 l
+356.68 385.17 l
+362.77 381.88 l
+368.62 378.26 l
+374.22 374.31 l
+379.53 370.04 l
+384.53 365.48 l
+389.21 360.64 l
+393.55 355.55 l
+397.53 350.21 l
+401.13 344.66 l
+404.34 338.91 l
+407.15 332.99 l
+409.55 326.93 l
+411.53 320.73 l
+413.07 314.44 l
+414.18 308.07 l
+414.84 301.65 l
+415.07 295.20 l
+414.84 288.75 l
+414.18 282.33 l
+413.07 275.96 l
+411.53 269.67 l
+409.55 263.47 l
+407.15 257.41 l
+404.34 251.49 l
+401.13 245.74 l
+397.53 240.19 l
+393.55 234.85 l
+389.21 229.76 l
+384.53 224.92 l
+379.53 220.36 l
+374.22 216.09 l
+368.62 212.14 l
+362.77 208.52 l
+356.68 205.23 l
+350.37 202.30 l
+343.88 199.74 l
+337.22 197.56 l
+330.42 195.76 l
+323.51 194.35 l
+316.52 193.34 l
+309.47 192.74 l
+302.40 192.53 l
+295.33 192.74 l
+288.28 193.34 l
+281.29 194.35 l
+274.38 195.76 l
+267.58 197.56 l
+260.92 199.74 l
+254.43 202.30 l
+248.12 205.23 l
+242.03 208.52 l
+236.18 212.14 l
+230.58 216.09 l
+225.27 220.36 l
+220.27 224.92 l
+215.59 229.76 l
+211.25 234.85 l
+207.27 240.19 l
+203.67 245.74 l
+200.46 251.49 l
+197.65 257.41 l
+195.25 263.47 l
+193.27 269.67 l
+191.73 275.96 l
+190.62 282.33 l
+189.96 288.75 l
+189.73 295.20 l
+189.96 301.65 l
+190.62 308.07 l
+191.73 314.44 l
+193.27 320.73 l
+195.25 326.93 l
+197.65 332.99 l
+200.46 338.91 l
+203.67 344.66 l
+207.27 350.21 l
+211.25 355.55 l
+215.59 360.64 l
+220.27 365.48 l
+225.27 370.04 l
+230.58 374.31 l
+236.18 378.26 l
+242.03 381.88 l
+248.12 385.17 l
+254.43 388.10 l
+260.92 390.66 l
+267.58 392.84 l
+274.38 394.64 l
+281.29 396.05 l
+288.28 397.06 l
+295.33 397.66 l
+302.40 397.87 l
+S
+BT
+0.000 0.000 0.000 rg
+/F2 1 Tf 18.00 0.00 -0.00 18.00 144.39 483.94 Tm [(X V) 70 (ar) -15 (iab) 20 (les)] TJ
+ET
+BT
+/F2 1 Tf 18.00 0.00 -0.00 18.00 369.72 483.94 Tm [(Y V) 70 (ar) -15 (iab) 20 (les)] TJ
+ET
+0.75 w
+[] 0 d
+  239.55 319.19 m
+  238.72 319.63 l
+  247.34 333.24 l
+  248.17 332.81 l
+b
+BT
+/F2 1 Tf 10.39 -6.00 6.00 10.39 175.46 355.52 Tm (c3) Tj
+ET
+  248.17 257.59 m
+  241.69 254.19 l
+  233.07 267.80 l
+  239.55 271.21 l
+b
+BT
+/F2 1 Tf 10.39 6.00 -6.00 10.39 178.33 229.91 Tm (c4) Tj
+ET
+  356.63 332.81 m
+  361.99 335.62 l
+  370.61 322.01 l
+  365.25 319.19 l
+b
+BT
+/F2 1 Tf 10.39 6.00 -6.00 10.39 418.37 349.18 Tm (c1) Tj
+ET
+  365.25 271.21 m
+  395.67 255.20 l
+  387.05 241.59 l
+  356.63 257.59 l
+b
+BT
+/F2 1 Tf 10.39 -6.00 6.00 10.39 415.49 236.25 Tm (c2) Tj
+ET
+Q q
+BT
+0.000 0.000 0.000 rg
+/F3 1 Tf 14.00 0.00 -0.00 14.00 209.98 541.45 Tm [(Explained V) 60 (ariance f) 20 (or CV 2)] TJ
+ET
+BT
+/F2 1 Tf 12.00 0.00 -0.00 12.00 252.04 4.32 Tm [(Canonical V) 70 (ar) -15 (iate2)] TJ
+ET
+Q
+endstream
+endobj
+10 0 obj
+6037
+endobj
+3 0 obj
+<<
+/Type /Pages
+/Kids [
+5 0 R
+8 0 R
+]
+/Count 2
+/MediaBox [0 0 576 576]
+>>
+endobj
+4 0 obj
+<<
+/ProcSet [/PDF /Text]
+/Font <</F2 12 0 R /F3 13 0 R >>
+/ExtGState << >>
+>>
+endobj
+11 0 obj
+<<
+/Type /Encoding
+/BaseEncoding /WinAnsiEncoding
+/Differences [ 45/minus 96/quoteleft
+144/dotlessi /grave /acute /circumflex /tilde /macron /breve /dotaccent
+/dieresis /.notdef /ring /cedilla /.notdef /hungarumlaut /ogonek /caron /space]
+>>
+endobj
+12 0 obj <<
+/Type /Font
+/Subtype /Type1
+/Name /F2
+/BaseFont /Helvetica
+/Encoding 11 0 R
+>> endobj
+13 0 obj <<
+/Type /Font
+/Subtype /Type1
+/Name /F3
+/BaseFont /Helvetica-Bold
+/Encoding 11 0 R
+>> endobj
+xref
+0 14
+0000000000 65535 f 
+0000000021 00000 n 
+0000000164 00000 n 
+0000012558 00000 n 
+0000012647 00000 n 
+0000000213 00000 n 
+0000000293 00000 n 
+0000006346 00000 n 
+0000006366 00000 n 
+0000006446 00000 n 
+0000012537 00000 n 
+0000012740 00000 n 
+0000012998 00000 n 
+0000013096 00000 n 
+trailer
+<<
+/Size 14
+/Info 1 0 R
+/Root 2 0 R
+>>
+startxref
+13199
+%%EOF