Mercurial > repos > jjkoehorst > sapp

diff annotation.xml @ 35:fa736576c7ed draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 16d0bc526ad02361a7c13231d4c50479c42d8d0f-dirty
author jjkoehorst
date Mon, 04 Jul 2016 10:37:59 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/annotation.xml	Mon Jul 04 10:37:59 2016 -0400
@@ -0,0 +1,13 @@
+<tool id="DAnnotation" name="Protein annotation" version="0.1">
+	<description>SAPP - Protein annotation module</description>
+	<requirements>
+		<container type="docker">jjkoehorst/sappdocker:PROTEINANNOTATION</container>
+	</requirements>
+	<command interpreter="docker">java -jar /proteinannotation/proteinAnnotation-0.0.1-SNAPSHOT-jar-with-dependencies.jar '-input' '$input' '-output' '$output' -format TURTLE</command>
+	<inputs>
+		<param format="ttl" label="genome ttl file" name="input" type="data"/>
+	</inputs>
+	<outputs>
+		<data format="ttl" label="Annotation: ${input.name}" name="output"/>
+	</outputs>
+</tool>
\ No newline at end of file