view rnaseq/cutadapt/test-data/rr.csfasta @ 13:1efd1975a68d

cutadapters sample added

# Mon Sep 28 22:46:46 2009 /share/apps/corona/bin/filter_fasta.pl --output=/data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/results.01/primary.20090929010043704 --name=solid176_20090923_Somali_Wild_Ass_a --tag=R3 --minlength=50 --mincalls=25 --prefix=G /data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/jobs/postPrimerSetPrimary.849/rawseq 
# Cwd: /state/partition1/home/pipeline
# Title: solid176_20090923_Somali_Wild_Ass_a
>853_7_53_R3
G..1...12.3.023.22.22.2.2..22..2...2222.222.2.2.22.
>853_7_78_R3
G..2...02.2.232.22.11.2.2..12..1...2222.222.2.3.22.
>853_7_88_R3
G..3...22.2.032.13.22.2.1..23..0...2130.132.1.2.30.
>853_7_132_R3
G..2...21.2.200.21.30.1.1..30..0...2112.202.2.0.22.
>853_7_141_R3
G..2...13.1.112.22.00.0.0..02..2...2222.200.2.2.22.
>853_7_146_R3
G..1...12.2.212.20.11.2.1..12..2...1311.223.1.3.21.
>853_7_269_R3
G..1...21.2.212.02.01.2.1..21..3...2210.113.2.3.32.
>853_7_321_R3
G..1...01.2.202.10.11.0.2..22..2...0332.111.2.0.22.
>853_7_386_R3
G..2...31.2.211.11.31.2.0..31..0...2030.312.1.0.22.
>853_7_405_R3
G..2...00.0.002.31.23.0.2..32..3...1032.120.2.1.22.
>853_7_411_R3
G..1...00.1.002.02.12.1.2..22..2...1020.312.2.0.21.
>853_7_445_R3
G..2...33.0.233.03.31.0.1..13..2...0020.222.2.2.22.
>853_7_469_R3
G..1...10.3.313.33.33.0.3..02..1...2333.230.2.3.32.
>853_7_474_R3
G..2...03.2.112.23.31.1.2..21..1...2221.322.2.1.21.
>853_7_497_R3
G..3...02.2.221.22.12.1.2..13..0...0033.230.2.3.21.
>853_7_587_R3
G..0...23.2.030.01.02.0.3..33..3...2101.030.0.2.20.
>853_7_630_R3
G..3...01.0.011.10.21.0.3..22..0...2101.020.3.0.01.
>853_7_655_R3
G..3...33.3.113.10.20.1.1..02..2...3132.200.1.1.21.
>853_7_692_R3
G..0...30.0.300.12.30.1.1..30..2...1022.320.3.3.33.
>853_7_715_R3
G..3...22.1.110.22.31.2.2..21..1...1021.330.1.2.31.
>853_7_719_R3
G..0...00.3.200.02.30.0.1..20..1...0003.301.2.2.33.
>853_7_743_R3
G..3...00.0.201.11.03.2.3..30..2...1112.300.2.2.31.
>853_7_791_R3
G..1...00.2.022.02.32.1.3..21..0...0222.120.1.0.22.
>853_7_801_R3
G..2...11.1.232.31.01.2.1..22..1...2222.122.2.1.22.
>853_7_845_R3
G..3...23.0.310.12.22.2.2..22..2...3232.303.2.2.33.
>853_7_868_R3
G..3...21.0.012.11.00.1.2..31..0...0101.022.2.3.03.
>853_7_1026_R3
G..2...02.1.333.11.10.2.2..21..3...1323.011.1.2.22.
>853_7_1057_R3
G..1...22.3.333.22.22.3.1..12..2...2122.332.1.3.21.
>853_7_1066_R3
G..2...22.2.332.12.01.3.0..21..2...0312.122.0.1.02.
>853_7_1107_R3
G..1...11.0.223.12.23.2.0..11..1...2012.132.0.3.30.
>853_7_1179_R3
G..3...02.1.133.00.21.1.3..20..1...3000.002.3.2.23.
>853_7_1198_R3
G..3...21.2.121.00.13.0.3..01..3...1131.330.1.3.01.
>853_7_1261_R3
G..0...12.3.202.00.03.2.0..22..0...2112.021.2.3.22.
>853_7_1321_R3
G..1...20.0.021.12.10.2.0..20..1...2002.012.2.1.22.
>853_7_1406_R3
G..0...11.0.212.11.00.2.0..23..1...2002.102.1.0.30.
>853_7_1431_R3
G..3...20.3.020.23.22.2.2..22..1...3302.132.0.2.02.
>853_7_1439_R3
G..3...12.2.013.21.20.2.1..21..2...2001.123.0.2.12.
>853_7_1524_R3
G..1...22.3.122.01.11.2.3..20..1...3021.103.2.0.32.
>853_7_1537_R3
G..0...11.1.233.22.22.1.3..22..2...3311.220.1.2.11.
>853_7_1592_R3
G..0...10.1.033.00.33.2.1..11..3...0031.333.0.3.32.
>853_7_1597_R3
G..3...00.2.102.11.21.2.1..00..0...0011.000.2.0.00.
>853_7_1650_R3
G..3...03.3.203.10.12.0.2..20..2...1113.121.2.1.33.
>853_7_1790_R3
G..2...13.3.311.21.13.1.0..11..3...0212.001.0.2.22.
>853_7_1795_R3
G..2...02.0.222.13.22.0.1..11..1...1220.213.0.1.20.
>853_7_1807_R3
G..3...11.3.213.13.02.1.3..20..1...3031.033.2.1.03.
>853_7_1872_R3
G..0...33.0.231.21.10.0.0..03..1...1323.110.0.2.01.
>853_7_1885_R3
G..2...33.1.320.12.01.2.0..11..3...1213.332.1.3.20.
>853_7_1910_R3
G..3...03.1.331.22.00.2.0..22..2...0120.020.1.2.02.
>853_8_43_R3
G.130..11.3.030.30.00.3.2..11..1...3221.22222.2.22.
>853_8_48_R3
G.023..11.1.210.22.30.0.0..22..3...2202.22222.2.22.
>853_8_57_R3
G.312..02.1.302.20.00.0.0..33..2...3313.22022.3.20.
>853_8_106_R3
G.223..02.3.313.23.03.2.0..02..1...2232.22222.2.22.
>853_8_196_R3
G.330..21.1.220.33.12.2.2..32..2...2212.22222.2.22.
>853_8_211_R3
G.012..11.1.302.10.10.1.2..02..2...2202.22222.2.21.
>853_8_227_R3
G.221..02.1.031.02.32.1.0..21..3...2212.30100.2.22.
>853_8_248_R3
G.123..02.3.222.22.22.2.2..22..2...2222.32222.2.22.
>853_8_253_R3
G.220..00.1.200.22.20.0.0..22..0...3222.32022.2.01.
>853_8_342_R3
G.203..21.2.201.01.02.1.2..23..1...0111.22220.2.22.
>853_8_400_R3
G.023..30.1.103.10.12.2.1..31..0...1332.10222.0.22.
>853_8_422_R3
G.222..11.2.102.31.21.2.2..12..1...2222.22322.1.22.
>853_8_555_R3
G.123..30.1.130.01.22.3.0..33..2...1322.30321.0.22.
>853_8_638_R3
G.230..00.1.000.21.33.0.3..32..1...3332.33031.3.02.
>853_8_735_R3
G.333..30.3.010.21.31.1.1..32..2...2120.20303.3.33.
>853_8_888_R3
G.020..30.1.232.03.23.2.2..22..3...1333.23322.2.22.
>853_8_893_R3
G.311..13.1.022.23.13.2.2..02..1...2222.22032.2.22.
>853_8_898_R3
G.110..33.0.233.22.03.0.3..21..1...3321.23332.0.03.
>853_8_920_R3
G.132..13.1.310.20.22.3.3..02..0...1222.23221.3.21.
>853_8_958_R3
G.133..23.1.021.12.02.0.1..03..1...1022.03300.1.23.
>853_8_1076_R3
G.202..31.0.331.13.02.2.1..23..2...2220.03103.3.33.
>853_8_1081_R3
G.311..02.2.013.33.12.0.3..21..0...3023.23223.3.13.
>853_8_1134_R3
G.210..12.3.333.11.31.3.3..33..3...2132.22323.3.23.
>853_8_1157_R3
G.113..13.1.210.02.30.0.2..03..0...1131.22300.3.32.
>853_8_1173_R3
G.123..31.3.102.32.11.1.3..00..0...1201.02202.2.00.
>853_8_1215_R3
G.120..31.1.212.20.03.1.0..02..1...0000.30212.1.13.
>853_8_1223_R3
G.022..01.0.203.00.12.1.0..22..0...0213.20020.3.02.
>853_8_1229_R3
G.123..10.0.032.22.10.3.0..03..3...0300.32013.0.20.
>853_8_1234_R3
G.333..20.3.233.21.22.2.2..20..2...0301.23003.3.23.
>853_8_1255_R3
G.321..32.1.231.20.12.2.3..31..2...2021.32202.2.22.
>853_8_1315_R3
G.122..13.1.232.30.31.0.3..02..2...2300.23122.2.23.
>853_8_1372_R3
G.020..01.0.313.03.03.2.2..11..2...2011.20122.2.00.
>853_8_1461_R3
G.130..23.0.211.33.31.2.2..01..1...0030.13010.1.22.
>853_8_1475_R3
G.031..13.1.301.11.00.1.0..22..2...1200.02001.0.00.
>853_8_1567_R3
G.122..22.2.110.33.11.0.2..22..3...0222.21031.3.22.
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G.030..23.0.033.00.01.0.3..11..2...1132.21021.0.20.
>853_8_1669_R3
G.023..00.1.000.20.03.0.3..01..0...0333.33320.0.01.
>853_8_1758_R3
G.001..13.0.123.11.33.3.0..00..2...3223.32232.1.01.
>853_8_1764_R3
G.322..11.0.112.13.22.2.1..02..0...2022.33002.1.22.
>853_8_1824_R3
G.010..03.2.232.32.11.3.1..00..2...1002.02103.3.13.
>853_8_1835_R3
G.211..22.2.310.12.02.2.0..22..1...2222.12220.2.11.
>853_8_1917_R3
G.011..03.2.233.33.32.2.2..22..3...1311.22132.2.02.
>853_8_1930_R3
G.230..33.2.200.21.02.1.2..03..2...2220.13110.3.22.
>853_8_1938_R3
G.300..33.3.100.13.20.3.2..32..2...3331.13321.3.23.
>853_8_1984_R3
G.302..33.2.010.11.12.3.1..23..3...1303.03112.1.22.
>853_8_2005_R3
G.010..10.1.212.02.12.1.0..20..3...3223.01201.0.02.
>853_8_2031_R3
G.002..03.3.313.13.03.2.2..03..2...11.0.33210.0.12.
>853_9_6_R3
G.32...21.1.122.22.22.2.22.22..2..22122222122.2.22.
>853_9_22_R3
G.222..22.2.222.12.22.2.22.22..2..22222222222.2.22.
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G.330..22.3.200.02.30.3.32.01..0..00002211122.2.32.
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G.132..01.2.321.13.03.0.13.22..0..32222222222.2.22.
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G.111..32.3.302.10.22.1.03.22..2..00112001122.2.22.
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G.333..33.1.022.22.22.0.33.22..2..20230222230.3.20.
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G.131..21.3.031.03.12.1.33.22..2..10212222222.1.22.
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G.200..02.2.120.22.32.0.11.32..3..12222222222.2.21.
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G.100..02.0.211.11.22.2.23.21..2..02222222222.2.22.
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G.303..23.0.202.22.21.0.22.11..3..23132321132.1.22.
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G.330..21.1.121.11.30.2.01.21..1..21021311332.3.33.
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G.203..01.1.003.33.30.2.20.20..2..33103102231.2.00.
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G.023..22.3.333.22.12.0.01.00..1..02000132132.3.12.
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G.011..01.0.100.02.31.0.21.31..0..10331320303.2.00.
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G.322..20.2.212.30.00.1.32.33..3..31300332130.1.23.
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G.320..30.2.100.02.33.3.13.13..0..31320203213.2.21.
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G.031..33.3.332.31.00.0.00.00..0..01003032220.3.10.
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G.331..13.3.100.02.00.0.13.22..0..01101000000.2.00.
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G.323..00.1.112.13.02.0.11.22..0..20212112031.0.22.
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G.223..31.2.331.23.20.3.02.33..1..32220000001.2.03.
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G.132..02.0.302.10.00.2.20.33..3..00011222222.2.23.
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G.002..33.3.300.32.31.2.32.12..0..22221121310.1.02.
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G.200..12.0.110.00.30.2.21.02..1..01212302222.0.20.
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G.203..11.2.012.00.22.1.31.10..1..30032322222.0.13.
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G.212..11.1.222.33.22.3.10.21..2..21121331133.2.32.
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G.232..31.2.232.22.11.3.32.32..3..22221223221.3.22.
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G.123..12.1.322.23.32.1.01.30..2..11132130123.0.11.
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G.132..33.1.031.11.02.2.22.31..3..23023232301.2.11.
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G.302..20.0.221.10.23.0.00.30..3..03300330011.0.21.
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G.010..33.2.101.23.32.2.22.21..1..21132222321.1.22.
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G.201..30.1.000.30.12.2.00.11..3..10202103212.2.22.
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G.233..30.3.200.22.22.0.32.13..1..20200130210.3.12.
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G.310..01.1.302.20.01.2.10.22..2..31002100302.3.21.
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G.213..21.0.332.22.22.3.10.30..3..23002000023.2.03.
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G.102..12.2.022.33.31.1.33.21..0..01130213112.0.02.
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G.333..13.1.232.01.30.1.02.12..2..22200100132.0.00.
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G.102..20.1.022.13.10.2.01.21..1..02222100100.3.12.
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G.210..01.1.313.01.11.3.30.00..3..30200002000.0.00.
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G.332..31.1.002.33.12.1.33.10..2..30302122021.3.10.
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G.202..03.3.220.12.20.2.13.33..3..20202031031.3.32.
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G.301..31.1.120.22.02.2.22.10..0..13002032122.3.31.
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G.302..12.1.100.31.12.1.23.20..3..31213313232.3.32.
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G.120..23.3.033.01.00.1.31.30..0..21232301301.0.02.
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G.300..30.1.223.11.11.2.33.20..3..23021302112.2.22.
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G.100..11.3.100.00.20.0.02.21..0..00000200300.0.00.
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G.211..31.1.122.11.01.0.10.30..2..03122202213.0.30.
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G.211..20.3.001.21.30.2.01.12..1..20220122000.0.00.
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G.132..01.3.112.13.31.0.30.20..1..31123321133.3.33.
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G.323..23.2.100.01.00.2.13.02..1..00131301001.2.01.
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G.101..03.3.313.21.00.3.00.01..1..31111113211.1.23.
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G.311..23.3.021.33.33.0.10.21..3..00010221332.3.21.
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G.202..10.1.110.22.01.2.31.13..1..31021112122.2.33.
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G.213..02.0.112.23.00.1.32.00..1..11121132311.1.11.
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G.222..11.0.112.12.23.1222.020.0.22222222222222.22.
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G.232..20.0.301.22.21.2210.120.2.20220212332211.22.
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G.011..12.0.133.20.32.2222.222.1.22222223222222.22.
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G.220..00.1.200.22.20.0002.222.0.21222213202222.01.
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G.112..02.0.203.10.21.2222.203.1.00222233222222.22.
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G.223..10.3.003.22.11.3331.302.2.12233301212312.22.
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G.030..11.0.121.11.22.2312.213.1.20002102132221.32.
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G.311..31.2.312.21.12.2212.232.2.12312032212222.01.
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G.332..01.2.022.02.10.0222.112.2.02223232102222.22.
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G.300..23.3.212.00.02.2123.322.2.23322223220021.31.
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G.222..00.0.012.02.33.1121.010.1.02031212012111.31.
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G.202..03.0.331.11.01.1111.111.0.23111222122221.21.
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G.210..31.3.002.22.11.0221.112.3.21022233103211.23.
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G.202..20.0.320.02.21.2020.022.2.10003031203122.02.
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G.002..31.0.122.13.02.2010.220.2.33311223103010.10.
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G.301..01.0.013.00.23.2021.230.1.30002020213231.00.
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G.032..03.1.003.21.20.0003.230.0.33333232030303.22.
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G.130..10.1.022.13.12.2220.221.2.21220202102121.22.
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G.033..13.0.111.00.13.3000.010.3.00333322102111.20.
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G.311..31.0.233.23.23.2200.013.1.33002022001312.23.
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G.210..31.3.110.11.22.0111.110.1.32320123323231.11.
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G.223..32.2.300.02.33.1122.333.1.00311010110021.33.
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G.311..23.1.021.31.10.0011.032.1.11231220120010.22.
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G.131..21.1.211.32.22.3120.023.3.23000312120231.11.
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G.030..10.1.100.32.30.3213.003.0.00333303300331.23.
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G.213..33.2.130.21.33.3333.011.3.20220033201033.32.
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G3022..1203.321.11.02.1011.101.2.11002232001001.00.
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G1322..3022.223.01.30.3010.300.0.21210001322111.00.
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G0320..3022.211.20.32.3322.132.0.12230210121023.32.
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G2320..1001.132.20.31.1130.200.2.00313111310201.30.
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G0102..3213.300.13.20.1230.012.2.21201101201101.11.
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G1312..0311.200.20.33.3031.202.2.13220211222312.31.
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G1113..0132.002.12.12.1211.021.2.01030131101300.00.
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G1112..3021.113.13.32.1222.021.0.03221230110030.12.
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G2123..3021.210.01.21.1030.320.0.33011200122002.20.
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G0220..0123.030.02.00.1202.212.1.12112113231030.30.
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G2122..1120.312.02.21.2122.301.3.21311222230111.21.
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G3100..3303.021.32.11.2033.010.0.11002211020233.11.
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G2122..2221.330.21.13.2201.223.1.11031233222013.11.
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G1101..0201.230.21.11.0211.011.2.21133221120011.31.
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G0132..0333.322.03.10.0333.031.3.31131021200322.31.
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G2232..3003.321.33.21.1213.220.2.32102202110203.11.
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G2120..1132.132.31.03.0223.333.3.20333332333122.32.
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G0012..2010.013.02.33.3100.023.3111210132310000.01.
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G0113..2012.323.11.31.1013.100.3233000022131322.23.
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G2222..0003.001.31.03.2321.212.2112303213222233.10.
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G3232..2100.113.00.32.0022.013.3012011132111200.32.
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G1112..0102.012.31.22.3311.302.2013011120011100.11.
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G3120..1223.211.31.30.0222.121.2023113003020123.22.
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G3100..1233.212.03.30.0222.222.2223112033122230.23.
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G2032..1111.323.03.33.1122.333.3320023310033303.22.
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G3122..0121.311.32.22.1011.211.3212001211320020.21.
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G0111..1113.233.33.11.1122.333.3220333130032133.30.
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G1132..1213.031.01.02.1203.100.0000303001111211.21.
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G0223..0211.202.33.01.0331.221.2022301102302130.33.
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G0120..2001.223.01.33.1110.223.1211113322312120.23.
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G2012..0303.013.23.02.0003.213.0221333022021233.21.
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G3220..0003.031.10.21.3331.103.1200000200020000.20.
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G0211..2113.103.01.33.0213.131.1131210030013322.02.
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G0300..2310.200.13.03.0001.002.0010100110000221.31.
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G1330..2233.002.20.20.2202.133.2200021211220113.12.
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G0103..2222.022.01.02.0333.321.0021301000320100.32.
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G1132..3202.000.12.31.1102.233.2222333002211003.13.
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G1003..0002.002.20.02.3012.111.3122000230000220.22.
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G0022..1221.311.20.00.0113.110.3001010121111120.12.
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G2222..2211.213.21.31.0330.000.2123203002130221.32.
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G0010..1121.112.21.03.1232.112.2020222301113102.20.
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G0230..1300.302.13.20.3301.001.1120323133133333.03.
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G1222..0003.000.32.11.1222.221.1210032122020030.00.
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G0222..3011.012.30.22.1103.110.3002200100201001.03.
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G0222..3110.331.21.22.2200.002.1300220220120202.02.
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G2220..3112.323.22.03.0233.200.2303221232100030.23.
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G2031..2313.121.13.03.2221.133.2023021131323031.30.
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G0031..2120.300.12.12.0002.301.3120030202312122.21.
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G2102..1001.321.20.10.3320.321.2211211101200321.12.
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G0002..3001.230.01.20.0231.002.1201113121120001.31.
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G2112..0210.212.32.13.3112.120.3320203131230023.00.
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G2131..0110.331.01.11.1331.123.3323103221332231.11.
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G2212..1122.321.32.12.2222.222.2221222222222222.22.
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G0002..1032.201.31.12.2222.023.2222321221222211.22.
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G1222..0202.222.02.22.0112.203.3022020223320130.01.
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G1000..3303.012.00.10.1330.230.1130120322111230.22.
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G0023..0033.320.22.11.1000.113.3012120222222222.22.
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G0221..1223.122.23.21.3212.222.2222223222302322.22.
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G2313..3001.121.12.21.3131.113.3333033333033111.32.
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G0022..1212.320.20.21.0321.211.2221121222221220.31.
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G2220..2012.210.10.23.1320.033.2200330301303233.30.
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G3322..1201.302.30.31.2220.323.3120021003322223.20.
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G1003..3000.300.02.00.1031.101.0000030003310030.01.
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G1003..1112.300.21.21.3033.033.1310310030223301.12.
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G2121..2130.122.13.03.1213.213.3203011112122011.33.
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G0222..2212.000.11.32.2310.033.2010101230012130.21.
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G3132..0121.311.02.13.3012.302.1113200103012221.12.
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G3130..2231.130.11.32.0000.002.1130332001003101.32.
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G3220..1323.110.21.21.0222.111.1133122100110022.20.
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G1330..0303.013.32.31.0102.120.0122011112122321.03.
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G2313..1101.211.13.33.1021.232.2222212122311133.21.
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G1030..1000.311.20.11.2301.310.1201113132331121.12.
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G0101..1330.232.02.00.1100.101.2013133213103321.23.
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G0231..0300.303.03.00.1013.132.1322212323121333.23.
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G2123..1133.031.00.23.0212.033.1300001310200300.33.
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G3313..2033.201.23.00.1111.120.0322310111121220.22.
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G0000..1111.011.02.21.0111.301.3310230303100110.13.
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G2131..0221.102.21.22.3102.213.1120211103300110.12.
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G0022..0211.010.21.03.1321.102.2020222023112220.22.
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G2300..3303.020.11.13.2001.010.0012022112202122.11.
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G1012..0221.030.13.01.0100.112.0102100222022222.22.
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G3011..0111.022.22.01.0232.021.3211120120120110.03.
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G3132..0213.321.13.32.3122.123.1021002130301210.23.
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G3233..2202.022.00.01.2101.020.2312112223233330.10.
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G3010..2002.023.21.2213211.120.1200222222231222.222
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G2223..1023.130.20.1212101.112.1021211212022221.221