Mercurial > repos > jjohnson > arriba

diff arriba_download_reference.xml @ 4:77021ad5037d draft

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"planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
author jjohnson
date Sat, 09 Oct 2021 15:41:49 +0000
parents 2d32e6c86c48
children 005b200c8841
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--- a/arriba_download_reference.xml	Fri Oct 08 20:44:25 2021 +0000
+++ b/arriba_download_reference.xml	Sat Oct 09 15:41:49 2021 +0000
@@ -12,7 +12,7 @@
     \$REF_SCRIPT '$arriba_reference_name' &&
     cp *.fa*  '$genome_fasta' &&
     cp *.gtf*  '$genome_gtf' &&
-    mv STAR*/* '$star_index.extra_files_path'
+    mv STAR_index_* '$star_index.extra_files_path'
     ]]></command>
     <inputs>
         <param name="arriba_reference_name" type="select" label="Select reference">