Mercurial > repos > jjohnson > contig_annotation_tool
comparison cat_bins.xml @ 1:86cd2e70b0dc draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit 2ed43d093253670323e67fda6db0cbb2ece98aad-dirty
| author | jjohnson |
|---|---|
| date | Sun, 24 Nov 2019 22:35:05 -0500 |
| parents | ad7507073c3f |
| children | 9a01840eac52 |
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| 0:ad7507073c3f | 1:86cd2e70b0dc |
|---|---|
| 1 <tool id="cat_bins" name="CAT bins" version="@VERSION.0"> | 1 <tool id="cat_bins" name="CAT bins" version="@VERSION@.0"> |
| 2 <description>annotate with taxonomic classification</description> | 2 <description>annotate with taxonomic classification</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements" /> | 6 <expand macro="requirements" /> |
| 48 <assert_contents> | 48 <assert_contents> |
| 49 <has_text text="1639" /> | 49 <has_text text="1639" /> |
| 50 </assert_contents> | 50 </assert_contents> |
| 51 </output> | 51 </output> |
| 52 </test> | 52 </test> |
| 53 <test> | |
| 53 <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/> | 54 <param name="mags" ftype="fasta" value="genome2.fna,genome3.fna"/> |
| 54 <expand macro="test_catdb"/> | 55 <expand macro="test_catdb"/> |
| 55 <param name="select_outputs" value="contig2classification"/> | 56 <param name="select_outputs" value="contig2classification"/> |
| 56 <output name="contig2classification"> | 57 <output name="contig2classification"> |
| 57 <assert_contents> | 58 <assert_contents> |