4 125893227 + 5 10 66301858 - 4 CTX 29 14 83 71 0.895173453996983 0.230769230769231 0.735384615384615 0.5 1 4 125893135 176 10 66301773 TTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTTCAGTAGCTGTCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTTT
125893140 125893160 125893180 125893200 125893220 125893240 125893260 125893280 125893300 125893320
. | . | . | . | . | . | . | . | . | . |
4:125893129-125893326 CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCATCAAAATTTTAAAATATCCCTT
HWI-EAS90_614M9:6:67:12631:17754#0 + CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACT
HWUSI-EAS1591_6113C:4:21:6779:18838#0 + CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACT
HWI-EAS90_614M9:1:32:10389:16117#0 + attttGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*Cagtagctgtcactgtaggcaaaaat
HWUSI-EAS1591_6113C:2:27:1355:21017#0 + ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCaacaat
HWUSI-EAS1591_6113C:1:93:16865:6051#0 + AAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCAT
HWI-EAS90_614M9:3:78:1961:11755#0 + ATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAaAAtGCCCAtTATTC*TGC
HWI-EAS231_614TA:5:6:17800:6620#0 + TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATAT
HWI-EAS90_614M9:3:95:10317:10581#0 + ATATATCATATTCTAAATTATGAAAAGAGAATATGA*Tctcttttccag*agccggccccggaagccaaaaagccccttattcttcctaattatctagggga
HWI-EAS292_102081428:2:115:1681:2531#0 + aaattatgaaaagagaatatgattctctttt*taggagctgttactgtagggaaaaatgcccattattctgctaaatatctaagtgaggggtgcttctatt
HWI-EAS90_614M9:1:67:1331:13704#0 + AATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATA
HWI-EAS231_614TA:2:73:4389:2239#0 + TGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAG
HWI-EAS231_614TA:7:88:14296:6002#0 + TGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAG
HWI-EAS231_614TA:1:26:7960:13504#0 + TTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGT
HWI-EAS90_614M9:7:18:13917:3050#0 + CTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCA
HWI-EAS292_102081428:1:66:16549:20224#0+ TCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TgCTAAATATCTAAGTGATGCTTGCTACTATTAACTGaAtGTATaTACTAGCGTCAA
HWI-EAS90_614M9:5:77:4642:6832#0 + CTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTaACTGAATGTATATACTAGCgtcaaa
HWI-EAS90_614M9:8:34:7077:4638#0 + CTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAA
HWI-EAS231_614TA:2:33:16646:21114#0 + CTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAAttttaaaatatccctt
HWUSI-EAS1591_6113C:4:9:4513:12290#0 - TTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCTGG
HWI-EAS231_614TA:7:49:16816:4213#0 - TATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCA
HWI-EAS231_614TA:1:118:16290:13237#0 - ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWI-EAS231_614TA:6:113:8101:10568#0 - TTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATG
HWI-EAS90_614M9:6:48:8352:11907#0 - ATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATT
HWUSI-EAS1591_6113C:4:39:14328:11130#0 - ATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCTGGGTTCAAGTGATTCTCCTG
HWI-EAS90_614M9:1:85:18838:8742#0 - TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCtgggttcaggTGATTCTCCTGCCTCTACCT
HWI-EAS90_614M9:4:32:9763:4986#0 - TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCaCCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCT
HWI-EAS231_614TA:4:103:18855:9257#0 - ATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGT
HWI-EAS292_102081428:2:23:3944:1922#0 - aTAtaGATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGT
HWUSI-EAS1591_6113C:2:117:3095:2051#0 - CTCTTTT*CAGtagctgtCaCCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAAT
HWI-EAS90_614M9:5:28:11006:5910#0 - TCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAA
HWI-EAS90_614M9:5:1:12903:5535#0 - TTTT*CAGTAgCTGTCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTTT
HWI-EAS90_614M9:2:56:9827:2778#0 - tcactgtaGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:4:47:5786:19724#0 - tcactGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:6:67:11670:7706#0 - TCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWUSI-EAS1591_6113C:1:117:14883:9756#0 - TCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:6:37:7790:16256#0 - CACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCCC
HWUSI-EAS1591_6113C:4:38:15097:15951#0 - ACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCCCT
_________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
HWUSI-EAS729_614T6:8:86:3208:16885#0 + TTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGC
HWUSI-EAS729_614T6:3:97:10823:18653#0 + ATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAA
HWUSI-EAS729_614T6:4:113:3054:5730#0 + TGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGgcaag
HWUSI-EAS729_614T6:2:63:5049:3137#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS729_614T6:5:95:4777:9034#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS729_614T6:8:79:9632:17904#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS1543_614TM:8:50:14524:11101#0 + ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWUSI-EAS729_614T6:3:79:10477:10666#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:4:80:3846:17138#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:4:83:3398:15440#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:5:37:19001:5491#0 + TGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCC
HWUSI-EAS729_614T6:8:113:1681:2586#0 + TCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCT
HWUSI-EAS729_614T6:8:3:18130:10917#0 + TATTTTGAAATATATATCATATtCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAA
HWUSI-EAS729_614T6:7:32:3784:11386#0 + TGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCT
HWUSI-EAS729_614T6:7:117:8731:4955#0 + ATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGA
HWUSI-EAS729_614T6:8:51:17611:11416#0 + TATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGAT
HWUSI-EAS1543_614TM:1:102:4785:3367#0 + TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS1543_614TM:6:60:2952:14857#0 + TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS729_614T6:5:55:11097:17856#0 + ATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTG
HWUSI-EAS729_614T6:2:8:16102:20401#0 + AAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAAT
HWUSI-EAS1543_614TM:1:75:3691:5075#0 + GATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGC
HWUSI-EAS729_614T6:8:52:15200:10784#0 + CACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCATCAAAattntAAAATATCCC
HWUSI-EAS1543_614TM:7:17:14845:19479#0 - ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATAATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWUSI-EAS729_614T6:3:13:15991:15051#0 - TATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS729_614T6:7:65:3141:2489#0 - TATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS729_614T6:8:54:5081:15134#0 - TATCATATTTTcAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS1543_614TM:4:38:16709:14763#0 - CATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTA
HWUSI-EAS1543_614TM:8:50:14524:11101#0 - TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS729_614T6:1:56:9586:15810#0 - TAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATaTAAGTGATGCTTGCTACTAT
HWUSI-EAS729_614T6:1:37:11212:13638#0 - TAAATTATGAAtAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTAT
HWUSI-EAS729_614T6:1:29:1825:18616#0 - AATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTA
HWUSI-EAS729_614T6:5:48:14044:12231#0 - AATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTA
HWUSI-EAS729_614T6:4:115:6035:15619#0 - ATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAA
HWUSI-EAS729_614T6:5:72:1269:20227#0 - aagagaatatgattctctTtT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGT
HWUSI-EAS729_614T6:7:32:3784:11386#0 - AAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGT
HWUSI-EAS1543_614TM:1:102:4785:3367#0 - AGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTA
HWUSI-EAS1543_614TM:6:60:2952:14857#0 - agtagCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGctactATTAACTGAATGTATATACTAGCGTCAAAATTTTA
_________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
66301780 66301800 66301820 66301840 66301860 66301880 66301900 66301920 66301940
. | . | . | . | . | . | . | . | . | .
10:66301762-66301954 GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTA
HWI-EAS231_614TA:7:82:16847:8457#0 + CACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccagggggtggaggttggag
HWI-EAS231_614TA:3:12:6209:13521#0 + CAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggagggtggagtg
HWI-EAS90_614M9:8:23:6627:13184#0 + GAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAaa
HWI-EAS90_614M9:6:39:4439:17404#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagtggga*agaggat
HWI-EAS292_102081428:4:40:3376:13334#0 - AAAAAtTAgcCAGGCATGGtGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:4:10:8095:5678#0 - AAAAAttagCcaGgcatGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:6:117:3466:13678#0 - gccaggggtggtggtgggcgcctgtaatcccagctactcgGGAGGTAGAGGCaGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGAT
HWI-EAS231_614TA:6:38:5961:6062#0 - aggcgtggtggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWI-EAS231_614TA:1:37:3390:19595#0 - acacaaaaattagccaggcaTGGTGGTGGGCaCCTGTAATCCCAGCTaCTcGGGAGGtAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACT
HWI-EAS90_614M9:1:98:9476:6999#0 - ggTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCAgTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTT
HWI-EAS231_614TA:8:4:10123:13264#0 - gTAatCCCAGCTaCtCGGGAGGTAGaggcaGGAGAATCaCTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGG
HWUSI-EAS1591_6113C:2:96:6055:2122#0 - actcgGGAGGTAGAGGCAGGAGAATCaCTTGAACCCAGGAGGTGGAaGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAA
HWI-EAS90_614M9:7:110:15112:12998#0 - GTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAAT
HWI-EAS90_614M9:5:12:2797:13435#0 - GCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAATATGATA
HWI-EAS231_614TA:7:82:16847:8457#0 - ggtggaggttggagtgagccaagatcatgccacttcactcTAGCCTGGGCAACAGAGGAAGACTCCACCTc*AAAAAAAAAAAGTGGGA*AGAGGATATGTA
____________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
HWUSI-EAS1543_614TM:3:9:10897:10640#0 + GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAaccccggaggtggag
HWUSI-EAS1543_614TM:5:85:1510:15876#0 + GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGtAGAGGCAGGggaatcacttgaacccaggagggggcg
HWUSI-EAS1543_614TM:6:36:6112:14330#0 + ACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggggggtggggg
HWUSI-EAS1543_614TM:5:9:12006:6856#0 + AAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGaatcacttgaaccccggagggggagggtgggggga
HWUSI-EAS729_614T6:4:52:7979:7186#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGggggatcactttaaaccca*gagggggggggtgggggggggcaaggt
HWUSI-EAS729_614T6:7:102:2873:18725#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccaggagggggagggtggggggagcgaagaa
HWUSI-EAS729_614T6:8:57:13075:5535#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaaacccggagggggggggtggagggagccaagaa
HWUSI-EAS1543_614TM:5:116:13350:19305#0+ CCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGgtggagggtggggtgagccaagatc
HWUSI-EAS729_614T6:2:14:10861:9808#0 + AGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAACCCaggagggggagggtggagtgagccaagatcat
HWUSI-EAS1543_614TM:6:116:11405:10100#0+ CATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtcacttgaacccaggaggtggagggtggggggagccaagatcaagcc
HWUSI-EAS1543_614TM:8:103:11766:8746#0 + GGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGgTGGaGTGAGCCAAGATCATGCCACTGCA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 + GTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACtTGAACCCaggaggtggaggttggagtgagccaagatcatgccaccgcac
HWUSI-EAS729_614T6:6:27:13980:13345#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCaggagggggaggttggagtgagccaagatcatgccactgccctctagccc
HWUSI-EAS729_614T6:7:80:16372:13691#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAAcCCAGGaggtggagggtggagtgagccaagatcatgccactgcactctagcct
HWUSI-EAS1543_614TM:4:24:17238:9026#0 + TCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGtGGAGGtTGGAGtGaGCCAAGATCATGCCACTGCACTCTAGCCtGGGCaACAGAGGaAGA
HWUSI-EAS729_614T6:4:85:2284:10568#0 + TGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTccacctc*acaacaaaa
HWUSI-EAS729_614T6:8:88:7531:4372#0 + TGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAaaaaagtgggaa
HWUSI-EAS1543_614TM:6:91:4071:17532#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACtCCACCtC*AaAAAAaaaaagcggga*agaggat
HWUSI-EAS1543_614TM:7:25:16711:4592#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagaGGGA*AGaggat
HWUSI-EAS729_614T6:3:34:6821:21373#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGaGGAAGACTCCACCTC*AAAAAAagaaagtggga*agaggat
HWUSI-EAS729_614T6:6:117:5396:15508#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAaaaaaagtggga*agaggat
HWUSI-EAS1543_614TM:8:35:4484:12519#0 - CACAAAaAttAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAG
HWUSI-EAS1543_614TM:4:40:15892:1713#0 - gggcgtgtgggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWUSI-EAS1543_614TM:5:90:12703:4722#0 - aTGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCA
HWUSI-EAS1543_614TM:3:102:1564:19915#0 - gggaggtagaggcgggaGAATCACTtgaaCcCaGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACT
HWUSI-EAS1543_614TM:5:5:18169:18490#0 - GGTAGAGGCaGGAGaAtCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAtGAAGACTCCAC
HWUSI-EAS729_614T6:4:44:11568:10646#0 - GGTAGAGGCAGGAGAAtcACTtgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS729_614T6:8:38:2365:13463#0 - ggtagaggcaggagaatcacttgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS1543_614TM:8:59:4470:6454#0 - GTAGAGGcAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACC
HWUSI-EAS729_614T6:1:58:5165:11774#0 - agaggCAgGAGAATCaCTtgAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS729_614T6:6:64:8262:4344#0 - AGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS1543_614TM:3:9:10897:10640#0 - AGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:5:85:1510:15876#0 - aggagaatcacttgaacccgggaggtggagGTtGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:7:109:3095:2034#0 - aggagaatcacttgagcccgggaggtggaggTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:4:24:17238:9026#0 - tcactTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGT
HWUSI-EAS1543_614TM:6:36:6112:14330#0 - acttgaacccaggaggtggaGGTTGGAGTGAGCCAAGATCATgCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGG
HWUSI-EAS1543_614TM:4:67:1427:8600#0 - ttgaccccagggggtgGAGGTtGGAGTGAGCCaaGatCatgccacTGCcCTCTAGCCTGGGcAACAGAGGaAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:6:77:17645:6273#0 - ttgaacccaggaggtggaggTTGGAGtGAGCcAAgATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:7:100:16004:10107#0- TTGAACCCaGGaGGTGGaGGTTGGAgTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS729_614T6:2:93:11989:6538#0 - tgagcccaggaggtggaGGTTGGAGTGAGCcAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGAA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 - caggaggggggggttggggtgagccaagatcatgccactgcactctagcCtGGGCAAcaGAGGAAgactccacctC*AAAAAAAAAAAGTGGGA*AGAGGAT
HWUSI-EAS729_614T6:3:11:5262:1432#0 - caggagggggggggtggagtgagccaagatcatgcccctgcactctagcCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGAT
____________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
5 7052198 - 0 10 66301865 + 8 CTX 0 22 0 81 0.761379310344828 0.482758620689655 0 0 1 5 7052278 164 10 66301947 AGCCATGGACCTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGTGAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTCAAAAAAAAAAAGTGGGAAGAGG
5:7052198-7052198 T
____________________
____________________
66301780 66301800 66301820 66301840 66301860 66301880 66301900 66301920 66301940 66301960
. | . | . | . | . | . | . | . | . | . |
10:66301769-66301962 CACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTATGAGCAG*A
HWI-EAS231_614TA:7:82:16847:8457#0 + CACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccagggggtggaggttggag
HWI-EAS231_614TA:3:12:6209:13521#0 + CAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggagggtggagtg
HWI-EAS90_614M9:8:23:6627:13184#0 + GAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAaa
HWI-EAS90_614M9:6:39:4439:17404#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagtggga*agaggat
HWI-EAS231_614TA:2:4:4943:8854#0 + AGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGAtATGtATGAGC
HWI-EAS231_614TA:4:78:6983:13721#0 + AGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTATGAGC
HWUSI-EAS1591_6113C:2:82:8140:13005#0 + TTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTATGAGCAGA
HWI-EAS231_614TA:4:36:3528:11249#0 + TTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTCAAAAAAAAAAGtGggAAGAGGAtatgt
HWI-EAS231_614TA:5:52:9612:8954#0 + CGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTCAAAAAAAAAAAGTGGGAAGAGG
HWI-EAS90_614M9:1:118:15320:11068#0 + AGCCATGGACCTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGTGAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATG
HWI-EAS90_614M9:3:104:3717:11676#0 + GAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCAtGCCACtgcactccagcctgggcaacagaggaagactccacctc*caaaaaaaaaaaaggga
HWI-EAS90_614M9:4:115:17151:16115#0 + AGTCCGGAGTTCTCAACGATGGTGAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTC
HWI-EAS90_614M9:5:27:7334:16234#0 + CTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGTGAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACT
HWI-EAS90_614M9:7:21:19162:4940#0 + TTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAgtGGga*AGaggataTGtatgagca
HWUSI-EAS1591_6113C:1:24:6705:7145#0 + AGCCATGGACCTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGCGAGTCCGTAGTTTGTTCCTTCAGGAGTGAGCcAAGATCATG
HWUSI-EAS1591_6113C:2:55:7685:7454#0 + AGTCCGTAGTTTGTTCCTTCAGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTCAAAAAAAAAAAGtGGGaA
HWI-EAS292_102081428:4:40:3376:13334#0 - AAAAAtTAgcCAGGCATGGtGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:4:10:8095:5678#0 - AAAAAttagCcaGgcatGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:6:117:3466:13678#0 - gccaggggtggtggtgggcgcctgtaatcccagctactcgGGAGGTAGAGGCaGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGAT
HWI-EAS231_614TA:6:38:5961:6062#0 - aggcgtggtggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWI-EAS231_614TA:8:4:10123:13264#0 - gTAatCCCAGCTaCtCGGGAGGTAGaggcaGGAGAATCaCTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGG
HWUSI-EAS1591_6113C:2:96:6055:2122#0 - actcgGGAGGTAGAGGCAGGAGAATCaCTTGAACCCAGGAGGTGGAaGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAA
HWI-EAS231_614TA:7:82:16847:8457#0 - ggtggaggttggagtgagccaagatcatgccacttcactcTAGCCTGGGCAACAGAGGAAGACTCCACCTc*AAAAAAAAAAAGTGGGA*AGAGGATATGTA
HWI-EAS231_614TA:3:12:6209:13521#0 - gaggttggagtgagcCAAGAtCaTGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTATGAG
______________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
HWUSI-EAS1543_614TM:6:36:6112:14330#0 + ACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggggggtggggg
HWUSI-EAS1543_614TM:5:9:12006:6856#0 + AAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGaatcacttgaaccccggagggggagggtgggggga
HWUSI-EAS729_614T6:4:52:7979:7186#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGggggatcactttaaaccca*gagggggggggtgggggggggcaaggt
HWUSI-EAS729_614T6:7:102:2873:18725#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccaggagggggagggtggggggagcgaagaa
HWUSI-EAS729_614T6:8:57:13075:5535#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaaacccggagggggggggtggagggagccaagaa
HWUSI-EAS1543_614TM:5:116:13350:19305#0+ CCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGgtggagggtggggtgagccaagatc
HWUSI-EAS729_614T6:2:14:10861:9808#0 + AGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAACCCaggagggggagggtggagtgagccaagatcat
HWUSI-EAS1543_614TM:6:116:11405:10100#0+ CATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtcacttgaacccaggaggtggagggtggggggagccaagatcaagcc
HWUSI-EAS1543_614TM:8:103:11766:8746#0 + GGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGgTGGaGTGAGCCAAGATCATGCCACTGCA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 + GTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACtTGAACCCaggaggtggaggttggagtgagccaagatcatgccaccgcac
HWUSI-EAS729_614T6:6:27:13980:13345#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCaggagggggaggttggagtgagccaagatcatgccactgccctctagccc
HWUSI-EAS729_614T6:7:80:16372:13691#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAAcCCAGGaggtggagggtggagtgagccaagatcatgccactgcactctagcct
HWUSI-EAS1543_614TM:4:24:17238:9026#0 + TCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGtGGAGGtTGGAGtGaGCCAAGATCATGCCACTGCACTCTAGCCtGGGCaACAGAGGaAGA
HWUSI-EAS729_614T6:4:85:2284:10568#0 + TGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTccacctc*acaacaaaa
HWUSI-EAS729_614T6:8:88:7531:4372#0 + TGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAaaaaagtgggaa
HWUSI-EAS1543_614TM:6:91:4071:17532#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACtCCACCtC*AaAAAAaaaaagcggga*agaggat
HWUSI-EAS1543_614TM:7:25:16711:4592#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagaGGGA*AGaggat
HWUSI-EAS729_614T6:3:34:6821:21373#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGaGGAAGACTCCACCTC*AAAAAAagaaagtggga*agaggat
HWUSI-EAS729_614T6:6:117:5396:15508#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAaaaaaagtggga*agaggat
HWUSI-EAS1543_614TM:4:21:14965:3057#0 + GTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTCAAAAAAAAAAAagaggga*agaggatatgaatgggca
HWUSI-EAS729_614T6:4:1:12928:15062#0 + GTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAgTGGGA*AGAGGATATGTATGAGCAG
HWUSI-EAS1543_614TM:8:35:4484:12519#0 - CACAAAaAttAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAG
HWUSI-EAS1543_614TM:4:40:15892:1713#0 - gggcgtgtgggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWUSI-EAS1543_614TM:5:90:12703:4722#0 - aTGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCA
HWUSI-EAS1543_614TM:3:102:1564:19915#0 - gggaggtagaggcgggaGAATCACTtgaaCcCaGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACT
HWUSI-EAS1543_614TM:5:5:18169:18490#0 - GGTAGAGGCaGGAGaAtCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAtGAAGACTCCAC
HWUSI-EAS729_614T6:4:44:11568:10646#0 - GGTAGAGGCAGGAGAAtcACTtgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS729_614T6:8:38:2365:13463#0 - ggtagaggcaggagaatcacttgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS1543_614TM:8:59:4470:6454#0 - GTAGAGGcAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACC
HWUSI-EAS729_614T6:1:58:5165:11774#0 - agaggCAgGAGAATCaCTtgAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS729_614T6:6:64:8262:4344#0 - AGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS1543_614TM:3:9:10897:10640#0 - AGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:5:85:1510:15876#0 - aggagaatcacttgaacccgggaggtggagGTtGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:7:109:3095:2034#0 - aggagaatcacttgagcccgggaggtggaggTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:4:24:17238:9026#0 - tcactTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGT
HWUSI-EAS1543_614TM:6:36:6112:14330#0 - acttgaacccaggaggtggaGGTTGGAGTGAGCCAAGATCATgCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGG
HWUSI-EAS1543_614TM:4:67:1427:8600#0 - ttgaccccagggggtgGAGGTtGGAGTGAGCCaaGatCatgccacTGCcCTCTAGCCTGGGcAACAGAGGaAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:6:77:17645:6273#0 - ttgaacccaggaggtggaggTTGGAGtGAGCcAAgATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:7:100:16004:10107#0- TTGAACCCaGGaGGTGGaGGTTGGAgTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS729_614T6:2:93:11989:6538#0 - tgagcccaggaggtggaGGTTGGAGTGAGCcAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGAA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 - caggaggggggggttggggtgagccaagatcatgccactgcactctagcCtGGGCAAcaGAGGAAgactccacctC*AAAAAAAAAAAGTGGGA*AGAGGAT
HWUSI-EAS729_614T6:3:11:5262:1432#0 - caggagggggggggtggagtgagccaagatcatgcccctgcactctagcCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGAT
______________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
10 66301858 + 4 4 125893225 - 1 CTX 15 28 71 81 0.735384615384615 0.5 0.889507154213037 0.243243243243243 1 10 66301777 153 4 125893154 TTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAATATGATA
66301780 66301800 66301820 66301840 66301860 66301880 66301900 66301920 66301940
. | . | . | . | . | . | . | . | . | .
10:66301762-66301954 GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGATATGTA
HWI-EAS231_614TA:7:82:16847:8457#0 + CACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccagggggtggaggttggag
HWI-EAS231_614TA:3:12:6209:13521#0 + CAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggagggtggagtg
HWI-EAS90_614M9:8:23:6627:13184#0 + GAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAaa
HWI-EAS90_614M9:6:39:4439:17404#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagtggga*agaggat
HWI-EAS292_102081428:4:40:3376:13334#0 - AAAAAtTAgcCAGGCATGGtGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:4:10:8095:5678#0 - AAAAAttagCcaGgcatGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGA
HWI-EAS90_614M9:6:117:3466:13678#0 - gccaggggtggtggtgggcgcctgtaatcccagctactcgGGAGGTAGAGGCaGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGAT
HWI-EAS231_614TA:6:38:5961:6062#0 - aggcgtggtggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWI-EAS231_614TA:1:37:3390:19595#0 - acacaaaaattagccaggcaTGGTGGTGGGCaCCTGTAATCCCAGCTaCTcGGGAGGtAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACT
HWI-EAS90_614M9:1:98:9476:6999#0 - ggTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCAgTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTT
HWI-EAS231_614TA:8:4:10123:13264#0 - gTAatCCCAGCTaCtCGGGAGGTAGaggcaGGAGAATCaCTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGG
HWUSI-EAS1591_6113C:2:96:6055:2122#0 - actcgGGAGGTAGAGGCAGGAGAATCaCTTGAACCCAGGAGGTGGAaGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAA
HWI-EAS90_614M9:7:110:15112:12998#0 - GTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAAT
HWI-EAS90_614M9:5:12:2797:13435#0 - GCAGGAGAATCACTTGAACCCAGGAGGTGACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAATATGATA
HWI-EAS231_614TA:7:82:16847:8457#0 - ggtggaggttggagtgagccaagatcatgccacttcactcTAGCCTGGGCAACAGAGGAAGACTCCACCTc*AAAAAAAAAAAGTGGGA*AGAGGATATGTA
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HWUSI-EAS1543_614TM:3:9:10897:10640#0 + GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAaccccggaggtggag
HWUSI-EAS1543_614TM:5:85:1510:15876#0 + GTAAAAACACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGtAGAGGCAGGggaatcacttgaacccaggagggggcg
HWUSI-EAS1543_614TM:6:36:6112:14330#0 + ACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaacccaggagggggggggtggggg
HWUSI-EAS1543_614TM:5:9:12006:6856#0 + AAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGaatcacttgaaccccggagggggagggtgggggga
HWUSI-EAS729_614T6:4:52:7979:7186#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGggggatcactttaaaccca*gagggggggggtgggggggggcaaggt
HWUSI-EAS729_614T6:7:102:2873:18725#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGgagaatcacttgaacccaggagggggagggtggggggagcgaagaa
HWUSI-EAS729_614T6:8:57:13075:5535#0 + GCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGagaatcacttgaaacccggagggggggggtggagggagccaagaa
HWUSI-EAS1543_614TM:5:116:13350:19305#0+ CCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGgtggagggtggggtgagccaagatc
HWUSI-EAS729_614T6:2:14:10861:9808#0 + AGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAACCCaggagggggagggtggagtgagccaagatcat
HWUSI-EAS1543_614TM:6:116:11405:10100#0+ CATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtcacttgaacccaggaggtggagggtggggggagccaagatcaagcc
HWUSI-EAS1543_614TM:8:103:11766:8746#0 + GGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGgTGGaGTGAGCCAAGATCATGCCACTGCA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 + GTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACtTGAACCCaggaggtggaggttggagtgagccaagatcatgccaccgcac
HWUSI-EAS729_614T6:6:27:13980:13345#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCaggagggggaggttggagtgagccaagatcatgccactgccctctagccc
HWUSI-EAS729_614T6:7:80:16372:13691#0 + CTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAAtCACTTGAAcCCAGGaggtggagggtggagtgagccaagatcatgccactgcactctagcct
HWUSI-EAS1543_614TM:4:24:17238:9026#0 + TCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGtGGAGGtTGGAGtGaGCCAAGATCATGCCACTGCACTCTAGCCtGGGCaACAGAGGaAGA
HWUSI-EAS729_614T6:4:85:2284:10568#0 + TGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTccacctc*acaacaaaa
HWUSI-EAS729_614T6:8:88:7531:4372#0 + TGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAaaaaagtgggaa
HWUSI-EAS1543_614TM:6:91:4071:17532#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACtCCACCtC*AaAAAAaaaaagcggga*agaggat
HWUSI-EAS1543_614TM:7:25:16711:4592#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAagaGGGA*AGaggat
HWUSI-EAS729_614T6:3:34:6821:21373#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGaGGAAGACTCCACCTC*AAAAAAagaaagtggga*agaggat
HWUSI-EAS729_614T6:6:117:5396:15508#0 + CAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAaaaaaagtggga*agaggat
HWUSI-EAS1543_614TM:8:35:4484:12519#0 - CACAAAaAttAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAG
HWUSI-EAS1543_614TM:4:40:15892:1713#0 - gggcgtgtgggtgggcacctgtaatcccagctactcGGGAGGTAGAGGCAGGAGAATCACTTGAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCAT
HWUSI-EAS1543_614TM:5:90:12703:4722#0 - aTGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGTAGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCA
HWUSI-EAS1543_614TM:3:102:1564:19915#0 - gggaggtagaggcgggaGAATCACTtgaaCcCaGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACT
HWUSI-EAS1543_614TM:5:5:18169:18490#0 - GGTAGAGGCaGGAGaAtCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAtGAAGACTCCAC
HWUSI-EAS729_614T6:4:44:11568:10646#0 - GGTAGAGGCAGGAGAAtcACTtgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS729_614T6:8:38:2365:13463#0 - ggtagaggcaggagaatcacttgaaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCAC
HWUSI-EAS1543_614TM:8:59:4470:6454#0 - GTAGAGGcAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACC
HWUSI-EAS729_614T6:1:58:5165:11774#0 - agaggCAgGAGAATCaCTtgAaCCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS729_614T6:6:64:8262:4344#0 - AGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC
HWUSI-EAS1543_614TM:3:9:10897:10640#0 - AGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:5:85:1510:15876#0 - aggagaatcacttgaacccgggaggtggagGTtGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:7:109:3095:2034#0 - aggagaatcacttgagcccgggaggtggaggTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAA
HWUSI-EAS1543_614TM:4:24:17238:9026#0 - tcactTGAACCCAGGAGGTGGAGGTTGGAGTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGT
HWUSI-EAS1543_614TM:6:36:6112:14330#0 - acttgaacccaggaggtggaGGTTGGAGTGAGCCAAGATCATgCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGG
HWUSI-EAS1543_614TM:4:67:1427:8600#0 - ttgaccccagggggtgGAGGTtGGAGTGAGCCaaGatCatgccacTGCcCTCTAGCCTGGGcAACAGAGGaAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:6:77:17645:6273#0 - ttgaacccaggaggtggaggTTGGAGtGAGCcAAgATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS1543_614TM:7:100:16004:10107#0- TTGAACCCaGGaGGTGGaGGTTGGAgTGAGCCAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGaCTCCACCTC*AAAAAAAAAAAGTGGGA
HWUSI-EAS729_614T6:2:93:11989:6538#0 - tgagcccaggaggtggaGGTTGGAGTGAGCcAAGATCATGCCACTGCACTCTAGCCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGAA
HWUSI-EAS1543_614TM:2:81:13732:11884#0 - caggaggggggggttggggtgagccaagatcatgccactgcactctagcCtGGGCAAcaGAGGAAgactccacctC*AAAAAAAAAAAGTGGGA*AGAGGAT
HWUSI-EAS729_614T6:3:11:5262:1432#0 - caggagggggggggtggagtgagccaagatcatgcccctgcactctagcCTGGGCAACAGAGGAAGACTCCACCTC*AAAAAAAAAAAGTGGGA*AGAGGAT
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125893140 125893160 125893180 125893200 125893220 125893240 125893260 125893280 125893300 125893320
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4:125893129-125893324 CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCATCAAAATTTTAAAATATCCC
HWI-EAS90_614M9:6:67:12631:17754#0 + CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACT
HWUSI-EAS1591_6113C:4:21:6779:18838#0 + CTAAAATTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACT
HWI-EAS90_614M9:1:32:10389:16117#0 + attttGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*Cagtagctgtcactgtaggcaaaaat
HWUSI-EAS1591_6113C:2:27:1355:21017#0 + ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCaacaat
HWUSI-EAS1591_6113C:1:93:16865:6051#0 + AAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCAT
HWI-EAS90_614M9:3:78:1961:11755#0 + ATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAaAAtGCCCAtTATTC*TGC
HWI-EAS231_614TA:5:6:17800:6620#0 + TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATAT
HWI-EAS90_614M9:3:95:10317:10581#0 + ATATATCATATTCTAAATTATGAAAAGAGAATATGA*Tctcttttccag*agccggccccggaagccaaaaagccccttattcttcctaattatctagggga
HWI-EAS292_102081428:2:115:1681:2531#0 + aaattatgaaaagagaatatgattctctttt*taggagctgttactgtagggaaaaatgcccattattctgctaaatatctaagtgaggggtgcttctatt
HWI-EAS90_614M9:1:67:1331:13704#0 + AATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATA
HWI-EAS231_614TA:2:73:4389:2239#0 + TGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAG
HWI-EAS231_614TA:7:88:14296:6002#0 + TGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAG
HWI-EAS231_614TA:1:26:7960:13504#0 + TTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGT
HWI-EAS90_614M9:7:18:13917:3050#0 + CTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCA
HWI-EAS292_102081428:1:66:16549:20224#0+ TCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TgCTAAATATCTAAGTGATGCTTGCTACTATTAACTGaAtGTATaTACTAGCGTCAA
HWI-EAS90_614M9:5:77:4642:6832#0 + CTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTaACTGAATGTATATACTAGCgtcaaa
HWI-EAS90_614M9:8:34:7077:4638#0 + CTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAA
HWUSI-EAS1591_6113C:4:9:4513:12290#0 - TTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCTGG
HWI-EAS231_614TA:7:49:16816:4213#0 - TATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCA
HWI-EAS231_614TA:1:118:16290:13237#0 - ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWI-EAS231_614TA:6:113:8101:10568#0 - TTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATG
HWI-EAS90_614M9:6:48:8352:11907#0 - ATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATT
HWUSI-EAS1591_6113C:4:39:14328:11130#0 - ATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCTGGGTTCAAGTGATTCTCCTG
HWI-EAS90_614M9:1:85:18838:8742#0 - TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACCTCCtgggttcaggTGATTCTCCTGCCTCTACCT
HWI-EAS90_614M9:4:32:9763:4986#0 - TTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCaCCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCT
HWI-EAS231_614TA:4:103:18855:9257#0 - ATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGT
HWI-EAS292_102081428:2:23:3944:1922#0 - aTAtaGATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGT
HWI-EAS90_614M9:5:18:17924:10181#0 - tctctttt*cagtagctgtcccctcctGGGTTCAAGtGaTtCTCCTGCCtCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAA
HWUSI-EAS1591_6113C:2:117:3095:2051#0 - CTCTTTT*CAGtagctgtCaCCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAAT
HWI-EAS90_614M9:5:28:11006:5910#0 - TCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAA
HWI-EAS90_614M9:5:1:12903:5535#0 - TTTT*CAGTAgCTGTCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTTT
HWI-EAS90_614M9:2:56:9827:2778#0 - tcactgtaGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:4:47:5786:19724#0 - tcactGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:6:67:11670:7706#0 - TCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWUSI-EAS1591_6113C:1:117:14883:9756#0 - TCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCC
HWI-EAS90_614M9:6:37:7790:16256#0 - CACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTAAAATATCCC
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HWUSI-EAS729_614T6:8:86:3208:16885#0 + TTATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGC
HWUSI-EAS729_614T6:3:97:10823:18653#0 + ATGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAA
HWUSI-EAS729_614T6:4:113:3054:5730#0 + TGAATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGgcaag
HWUSI-EAS729_614T6:2:63:5049:3137#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS729_614T6:5:95:4777:9034#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS729_614T6:8:79:9632:17904#0 + AATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAA
HWUSI-EAS1543_614TM:8:50:14524:11101#0 + ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWUSI-EAS729_614T6:3:79:10477:10666#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:4:80:3846:17138#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:4:83:3398:15440#0 + TTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCC
HWUSI-EAS729_614T6:5:37:19001:5491#0 + TGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCC
HWUSI-EAS729_614T6:8:113:1681:2586#0 + TCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCT
HWUSI-EAS729_614T6:8:3:18130:10917#0 + TATTTTGAAATATATATCATATtCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAA
HWUSI-EAS729_614T6:7:32:3784:11386#0 + TGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCT
HWUSI-EAS729_614T6:7:117:8731:4955#0 + ATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGA
HWUSI-EAS729_614T6:8:51:17611:11416#0 + TATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGAT
HWUSI-EAS1543_614TM:1:102:4785:3367#0 + TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS1543_614TM:6:60:2952:14857#0 + TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS729_614T6:5:55:11097:17856#0 + ATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTG
HWUSI-EAS729_614T6:2:8:16102:20401#0 + AAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAAT
HWUSI-EAS1543_614TM:1:75:3691:5075#0 + GATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGC
HWUSI-EAS729_614T6:8:52:15200:10784#0 + CACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCATCAAAattntAAAATATCCC
HWUSI-EAS1543_614TM:7:17:14845:19479#0 - ATTTTGAAATATATATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATAATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAAT
HWUSI-EAS729_614T6:3:13:15991:15051#0 - TATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS729_614T6:7:65:3141:2489#0 - TATCATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS729_614T6:8:54:5081:15134#0 - TATCATATTTTcAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TG
HWUSI-EAS1543_614TM:4:38:16709:14763#0 - CATATTTTGAAATATATATCATATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTA
HWUSI-EAS1543_614TM:8:50:14524:11101#0 - TATTCTAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCT
HWUSI-EAS729_614T6:1:56:9586:15810#0 - TAAATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATaTAAGTGATGCTTGCTACTAT
HWUSI-EAS729_614T6:1:37:11212:13638#0 - TAAATTATGAAtAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTAT
HWUSI-EAS729_614T6:1:29:1825:18616#0 - AATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTA
HWUSI-EAS729_614T6:5:48:14044:12231#0 - AATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTA
HWUSI-EAS729_614T6:4:115:6035:15619#0 - ATTATGAAAAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAA
HWUSI-EAS729_614T6:5:72:1269:20227#0 - aagagaatatgattctctTtT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGT
HWUSI-EAS729_614T6:7:32:3784:11386#0 - AAGAGAATATGATTCTCTTTT*CAGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGT
HWUSI-EAS1543_614TM:1:102:4785:3367#0 - AGTAGCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGCTACTATTAACTGAATGTATATACTAGCGTCAAAATTTTA
HWUSI-EAS1543_614TM:6:60:2952:14857#0 - agtagCTGTCACTGTAGGCAAAAATGCCCATTATTC*TGCTAAATATCTAAGTGATGCTTGctactATTAACTGAATGTATATACTAGCGTCAAAATTTTA
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