view example/tumor.sclip.txt @ 0:acc8d8bfeb9a

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author jjohnson
date Wed, 08 Feb 2012 16:59:24 -0500
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4	125892327	+	HWUSI-EAS1591_6113C:3:17:12332:19420#0	CC	CC
4	125892458	+	HWUSI-EAS1591_6113C:4:91:6281:9961#0	GACTAACCACCACGGTACATGTTTTCCTATGTAAAAAACCTGCACATTCTACACATGTATCCCAGAACTTAAAGTAAAACAC	B@C@?:CC>CCBCCCCACBCDCCCCCC;<:<9CCCCC@CCCCCBCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCAC
4	125893225	+	HWI-EAS90_614M9:5:18:17924:10181#0	CCCTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAA	#######@@7@:8@><16+6(B>AABCAA3AB@CC6CCCCCCCDCCCCCCBCCDCCCCCCCCCCCCDCCCCCCCCCCCCCC
4	125893227	+	HWI-EAS90_614M9:4:32:9763:4986#0	CTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCT	CCCC@CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
4	125893227	+	HWI-EAS90_614M9:5:1:12903:5535#0	CTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTTT	B;@@>DABBB>DBAAAB@BABDDDDCCBCDACCBCCCCCCCBCCCCCCCCCCCCCCCCCCCCCCBCCCCCCCCCCCCCCCCCC
4	125893227	+	HWUSI-EAS1591_6113C:2:117:3095:2051#0	CTCCTGGGTTCAAGTGATTCTCCTGCCTCTACCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAAT	65977A::??BB>?BA8???=BDCCCCBCCCCCBCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCDCCCCCCCCCCCCCCC
4	125893227	+	HWUSI-EAS1591_6113C:4:39:14328:11130#0	CTCCTGGGTTCAAGTGATTCTCCTG	CCCCCCCCCCCCCCCCCCCCCCCCC
4	125893227	+	HWUSI-EAS1591_6113C:4:9:4513:12290#0	CTCCTGG	CCCCCCC
4	125893365	-	HWI-EAS292_102081428:1:66:17910:13190#0	TAACTACTT	GFGFDGGGG
4	125893979	-	HWUSI-EAS1591_6113C:1:81:16173:11673#0	ATAAAATATTTATATTTTATATATTTGTATTCAAT	CCCCCCCCCCCCCCCCCCCCCCCCCCCDCCCCCCC
10	66301086	-	HWI-EAS231_614TA:6:108:5679:13132#0	AAACATGGTTCAAATAAATTATTTATAAAGAAG	CCCCCCCCCCCCCCCCCBBCCCCCCCCCCCCCC
10	66301086	-	HWI-EAS292_102081428:1:76:17776:13382#0	AAACATGGTTCAAATAAATTATTTATAAAGAAG	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
10	66301858	+	HWI-EAS231_614TA:1:37:3390:19595#0	ACAGCTACT	CCCCCCCCC
10	66301858	+	HWI-EAS90_614M9:1:98:9476:6999#0	ACAGCTACTGAAAAGAGAATCATATTCTCTTTT	CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10	66301858	+	HWI-EAS90_614M9:5:12:2797:13435#0	ACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAATATGATA	CCCCCCDCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10	66301858	+	HWI-EAS90_614M9:7:110:15112:12998#0	ACAGCTACTGAAAAGAGAATCATATTCTCTTTTCATAATTTAGAATATGATATATATTTCAAAAT	CCCCCCBCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10	66301865	-	HWI-EAS231_614TA:4:36:3528:11249#0	TTTGTTCCTTCA	CCCCCCCCCCCC
10	66301865	-	HWI-EAS231_614TA:5:52:9612:8954#0	CGTAGTTTGTTCCTTCA	CCCCCCCCCCCCCCCCC
10	66301865	-	HWI-EAS90_614M9:1:118:15320:11068#0	AGCCATGGACCTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGTGAGTCCGTAGTTTGTTCCTTCA	CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCDCCCCCCCCCCCCCCCC@CCBCCCDDCCDBCDBCCDBCBCDDD
10	66301865	-	HWI-EAS90_614M9:3:104:3717:11676#0	GAGTCCGTAGTTTGTTCCTTCA	BBBBBB@9B@878;69?B9AB>
10	66301865	-	HWI-EAS90_614M9:4:115:17151:16115#0	AGTCCGGAGTTCTCAACGATGGTGAGTCCGTAGTTTGTTCCTTCA	CCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10	66301865	-	HWI-EAS90_614M9:5:27:7334:16234#0	CTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGTGAGTCCGTAGTTTGTTCCTTCA	CCCCCCCDCCCCCCCCCCCCCBCCBCCCDCCCCCCBCCCCCCCCC@CC>CAC@CCBABCADDDBDBBBBBB
10	66301865	-	HWI-EAS90_614M9:7:21:19162:4940#0	TTCA	CCCC
10	66301865	-	HWUSI-EAS1591_6113C:1:24:6705:7145#0	AGCCATGGACCTTGTGGTGGGTTCTTAACAATGGTGAGTCCGGAGTTCTTAACGATGGCGAGTCCGTAGTTTGTTCCTTCA	CCCCCCCCCCCCCCCCCDCCCCCCCCCCCCCCCCDCCCDCCCCCCACCCCCCDCCDC98A@C<C?CB9@BA@@BBCBBD@B
10	66301865	-	HWUSI-EAS1591_6113C:2:55:7685:7454#0	AGTCCGTAGTTTGTTCCTTCA	CCCCCCCCCCCCCCCCCCCCC
10	66301871	-	HWI-EAS90_614M9:3:114:11684:16725#0	ATCAAGAAAATTAATAAACCCTAGCCCATAT	BBBBBBBBB==BBBBBBBBBBBBBBBBBBBB
10	66302136	+	HWI-EAS231_614TA:4:119:4524:15992#0	TAAATTCCGGACACAGTACTACTATGTTGAAGAGGAGTTG	CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC