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view datatypes_conf.xml @ 3:f109453ecfa2

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readCufflinks() parses feature file based on file extension: .gtf/.gff3 Also added gtfFile and genome input to cummerbund_wrapper.xml
author Jim Johnson <jj@umn.edu>
date Fri, 15 Nov 2013 13:39:14 -0600
parents da7241f92ecf
children
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<?xml version="1.0"?>
<datatypes>
    <datatype_files>
        <datatype_file name="cuffdata.py"/>
    </datatype_files>
    <registration>
      <!-- composite dataset with cuffdiff outputs in the extra files path -->
      <datatype extension="cuffdata" type="galaxy.datatypes.cuffdata:CuffDiffData"/>
      <!-- SQLite database -->
      <datatype extension="cuffdatadb" type="galaxy.datatypes.cuffdata:CuffDataDB"/>
    </registration>
</datatypes>