# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1360034600 21600
# Node ID ebb9a992508df98cb0afd49c3c1ff7ad99b0d6d1
# Parent  da7241f92ecfb36671062ed276bdf18604cb94d4
Remove duplicate cds_diff_output option

diff -r da7241f92ecf -r ebb9a992508d cuffdiff_wrapper.py
--- a/cuffdiff_wrapper.py	Mon Feb 04 19:50:25 2013 -0500
+++ b/cuffdiff_wrapper.py	Mon Feb 04 21:23:20 2013 -0600
@@ -98,7 +98,6 @@
     parser.add_option( "--genes_exp_output", dest="genes_exp_output" )
     parser.add_option( "--tss_groups_exp_output", dest="tss_groups_exp_output" )
     parser.add_option( "--cds_exp_fpkm_tracking_output", dest="cds_exp_fpkm_tracking_output" )
-    parser.add_option( "--cds_diff_output", dest="cds_diff_output" )
     parser.add_option( "--isoforms_count_tracking_output", dest="isoforms_count_tracking_output" )
     parser.add_option( "--genes_count_tracking_output", dest="genes_count_tracking_output" )
     parser.add_option( "--cds_count_tracking_output", dest="cds_count_tracking_output" )