Mercurial > repos > jjohnson > encyclopedia_fasta_to_prosit_csv
diff test-data/PeptidesForProsit.csv @ 0:d0202c597434 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit 8f99967c46243d2ad661287ce6d17c5824dbc533-dirty"
| author | jjohnson |
|---|---|
| date | Fri, 19 Jun 2020 10:21:58 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/PeptidesForProsit.csv Fri Jun 19 10:21:58 2020 -0400 @@ -0,0 +1,382 @@ +modified_sequence,collision_energy,precursor_charge +EDFFTVFDSLLR,31.166668,2 +LPSLMTFITRLVR,31.166668,2 +TLEDASQFADFIK,31.166668,2 +FSGISIDLICAR,31.166668,2 +FVYEVSKK,31.166668,2 +VILQEFVR,31.166668,2 +TETALNALK,31.166668,2 +SPVTDDIIKFLTDTTLR,31.166668,2 +QSWDLEQIMSQHGF,31.166668,2 +VFNLALRFVK,31.166668,2 +TLKNFSAQEK,31.166668,2 +TVLVENYLKR,31.166668,2 +TETALNALKLVTDENK,31.166668,2 +DLPIAQLIK,31.166668,2 +SIIPSNVYGIETTRHR,31.166668,2 +VRLLVMK,31.166668,2 +WSGLVESK,31.166668,2 +TCAGTSPIR,31.166668,2 +YQINCIR,31.166668,2 +ILQELAQRFVYEVSK,31.166668,2 +SWANLFEK,31.166668,2 +QIIKEDTK,31.166668,2 +IFLGCLILAAK,31.166668,2 +INMMMSMNR,31.166668,2 +NLDEKDLR,31.166668,2 +EEQLYKSQR,31.166668,2 +YKLGIGLAMCK,31.166668,2 +YQINCIRYR,31.166668,2 +QLLQLLNWDLR,31.166668,2 +VFGITGPVSTVGATAAENK,31.166668,2 +YTDGLFTLEDINLMER,31.166668,2 +YETPLIELLKR,31.166668,2 +SDAASGDNINGTTAAVDVN,31.166668,2 +SFNEDYGDHK,31.166668,2 +TINLLLSLTCKR,31.166668,2 +TNSLYLK,31.166668,2 +TSNISQIPDFTK,31.166668,2 +NLLRNLDEK,31.166668,2 +TLNDSSPLNK,31.166668,2 +GPSKTALLSK,31.166668,2 +HLTRLPSLMTFITR,31.166668,2 +TYNIDSK,31.166668,2 +RLNAIQR,31.166668,2 +LGIGLAMCK,31.166668,2 +FTELLDDHEDAIVVLAK,31.166668,2 +ELDEIAPVPDAFVPIIK,31.166668,2 +SNWSNYFKS,31.166668,2 +SWKCGGMR,31.166668,2 +EEESIKDAPK,31.166668,2 +DIVNKTSISHSR,31.166668,2 +YETPLIELLK,31.166668,2 +LRSIIPSNVYGIETTR,31.166668,2 +AIKLWAQR,31.166668,2 +TGLNKQIIK,31.166668,2 +FQISQFLNFHLKER,31.166668,2 +ENRPIPTIKPFNFSK,31.166668,2 +TCAGTSPIRSNNR,31.166668,2 +HRIFLGCLILAAK,31.166668,2 +NTYEATMKHYIR,31.166668,2 +AQESLNNFHK,31.166668,2 +KSWANLFEK,31.166668,2 +RINMMMSMNR,31.166668,2 +KNMSDGMAR,31.166668,2 +EDFFTVFDSLLRER,31.166668,2 +VWNPKIYAQDR,31.166668,2 +EVNTIER,31.166668,2 +VFNLALR,31.166668,2 +FHNDSSPLNK,31.166668,2 +HFLRTSNISQIPDFTK,31.166668,2 +FHNDSSPLNKHWAR,31.166668,2 +WNDNVNR,31.166668,2 +TVLVENYLK,31.166668,2 +TNSMIDIALPAPPLTK,31.166668,2 +FVYEVSK,31.166668,2 +MIGILHRDLPIAQLIK,31.166668,2 +MDQLLSDLLRAR,31.166668,2 +KTNSMIDIALPAPPLTK,31.166668,2 +KSNWSNYFK,31.166668,2 +HVTREDFFTVFDSLLR,31.166668,2 +FVKEELVIR,31.166668,2 +LGNLMKHTK,31.166668,2 +LPSLMTFITR,31.166668,2 +TLPELHESNNISDK,31.166668,2 +LLVTHYLSLMAQNK,31.166668,2 +AYLSTMYIGLDFNIENK,31.166668,2 +EGSFETEQETANR,31.166668,2 +RSNLSNYSNR,31.166668,2 +RMIGILHR,31.166668,2 +NAFEAQIALGK,31.166668,2 +DAGGKIFTYGSYR,31.166668,2 +KELDEIAPVPDAFVPIIK,31.166668,2 +KVILQEFVR,31.166668,2 +GVQITNDIFSNK,31.166668,2 +MSNYEALLKFNR,31.166668,2 +IKFSGISIDLICAR,31.166668,2 +MCEYSKALHILLK,31.166668,2 +EKMDQLLSDLLR,31.166668,2 +GYDLPDEVFDENEK,31.166668,2 +YLLGEILRNTYEATMK,31.166668,2 +LDQPQVPLSLTLSDK,31.166668,2 +NTYEATMK,31.166668,2 +FLTDTTLR,31.166668,2 +SNWSNYFK,31.166668,2 +GSDEQHLKWSGLVESK,31.166668,2 +LNDSLIQELK,31.166668,2 +TYLELFGGK,31.166668,2 +VQVLKILQELAQR,31.166668,2 +YLLEASEESQK,31.166668,2 +AGGVLHDDENLWSFGKSK,31.166668,2 +ALHILLKSPVTDDIIK,31.166668,2 +HVSDYVNDICFVK,31.166668,2 +RTCAGTSPIR,31.166668,2 +FSPRTYNIDSK,31.166668,2 +TINLLLSLTCK,31.166668,2 +NFSAQEKDIVNK,31.166668,2 +EEYMLTIK,31.166668,2 +KEEYMLTIK,31.166668,2 +YLLGEILR,31.166668,2 +YKFYLEITAYTR,31.166668,2 +GVQITNDIFSNKK,31.166668,2 +LIVEEHVSITANYTSGK,31.166668,2 +LGVHGPGSDIDTLVVVPK,31.166668,2 +SPVTDDIIK,31.166668,2 +FQISQFLNFHLK,31.166668,2 +NLDARHETVK,31.166668,2 +IRTLPELHESNNISDK,31.166668,2 +NMSDGMARDAGGK,31.166668,2 +EMVQYLASTTASIIK,31.166668,2 +FINRLIK,31.166668,2 +IYAQDRSHR,31.166668,2 +LVTDENKEEESIK,31.166668,2 +IDVQSLLGWGTDVYIK,31.166668,2 +NFSAQEK,31.166668,2 +MDQLLSDLLR,31.166668,2 +NMSDGMAR,31.166668,2 +LLVMKLEVLAGIK,31.166668,2 +HWAEYTDGLLILR,31.166668,2 +IFLACLILSAK,31.166668,2 +DATGLPSTIHR,31.166668,2 +ARPVILKTGLNK,31.166668,2 +ARPVILK,31.166668,2 +LEVLAGIK,31.166668,2 +MIGILHR,31.166668,2 +KYLLEASEESQK,31.166668,2 +YGSHKTETALNALK,31.166668,2 +EELVIRIAHK,31.166668,2 +EENTLVLGDIFQECSAK,31.166668,2 +DVTNIANNTVANTNYVR,31.166668,2 +TKIINSGK,31.166668,2 +LVTDENK,31.166668,2 +HSNVQTPTLMATSVYLAK,31.166668,2 +FIQDMYFK,31.166668,2 +CGGMRWAHR,31.166668,2 +GSDEQHLK,31.166668,2 +MSNYEALLK,31.166668,2 +AGGVLHDDENLWSFGK,31.166668,2 +IINSGKFVK,31.166668,2 +ALHILLK,31.166668,2 +SIIPSNVYGIETTR,31.166668,2 +MSKYQINCIR,31.166668,2 +KEGSFETEQETANR,31.166668,2 +WSGLVESKVR,31.166668,2 +ICQLYPNACSAVILNR,31.166668,2 +QDLARSSDQR,31.166668,2 +NDFFFRYK,31.166668,2 +SNLSNYSNRIR,31.166668,2 +GLQEIQSCYPK,31.166668,2 +DLRALNGTR,31.166668,2 +SWANLFEKNDFFFR,31.166668,2 +TVEKWNDNVNR,31.166668,2 +INMMMSMNRR,31.166668,2 +ERAQESLNNFHK,31.166668,2 +IFTYGSYR,31.166668,2 +LPYNAVINPHIER,31.166668,2 +SNLSNYSNR,31.166668,2 +VDIHIPCTEFVNLCR,31.166668,2 +VVPSSNYPTPPGSPGEK,31.166668,2 +EMVQYLASTTASIIKIK,31.166668,2 +ILQELAQR,31.166668,2 +FYLEITAYTR,31.166668,2 +TYNIDSKHDNK,31.166668,2 +ILPRDATGLPSTIHR,31.166668,2 +VTDEILELVPKPNVFR,31.166668,2 +LNDSLIQELKK,31.166668,2 +EDFFTVFDSLLR,33.0,3 +IFLACLILSAKFHNDSSPLNK,33.0,3 +TLEDASQFADFIK,33.0,3 +FSGISIDLICAR,33.0,3 +DATGLPSTIHRIFLACLILSAK,33.0,3 +VFGITGPVSTVGATAAENKLNDSLIQELK,33.0,3 +SPVTDDIIKFLTDTTLR,33.0,3 +QSWDLEQIMSQHGF,33.0,3 +AYLSTMYIGLDFNIENKK,33.0,3 +TETALNALKLVTDENK,33.0,3 +VNTEDLILDLQPLLEPIKQDLAR,33.0,3 +VDIHIPCTEFVNLCRSFNEDYGDHK,33.0,3 +SSSNMSIPSLASTSTLSTLESRR,33.0,3 +SIIPSNVYGIETTRHR,33.0,3 +SPNPVSLTQLAQYYDDSTKLTR,33.0,3 +GLEKPEPIIVTVVSNDESYLFR,33.0,3 +LVRYTNVYTPTLLTAACYLNK,33.0,3 +YQINCIRYR,33.0,3 +YCIGPVNEELAPYIMETMK,33.0,3 +VFGITGPVSTVGATAAENK,33.0,3 +FVKGYDLPDEVFDENEK,33.0,3 +LKDVTNIANNTVANTNYVR,33.0,3 +SFNEDYGDHK,33.0,3 +TINLLLSLTCKR,33.0,3 +TSNISQIPDFTK,33.0,3 +LDQPQVPLSLTLSDKNLLR,33.0,3 +FTELLDDHEDAIVVLAK,33.0,3 +YTNVYTPTLLTAACYLNKLK,33.0,3 +DIVNKTSISHSR,33.0,3 +YETPLIELLK,33.0,3 +FQISQFLNFHLKER,33.0,3 +ENRPIPTIKPFNFSK,33.0,3 +RINMMMSMNR,33.0,3 +EDFFTVFDSLLRER,33.0,3 +VWNPKIYAQDR,33.0,3 +HFLRTSNISQIPDFTK,33.0,3 +FHNDSSPLNKHWAR,33.0,3 +SKSDAASGDNINGTTAAVDVN,33.0,3 +IFTYGSYRLGVHGPGSDIDTLVVVPK,33.0,3 +IQAKFTELLDDHEDAIVVLAK,33.0,3 +RSPNPVSLTQLAQYYDDSTK,33.0,3 +MDQLLSDLLRAR,33.0,3 +KTNSMIDIALPAPPLTK,33.0,3 +SFNEDYGDHKVFNLALR,33.0,3 +LLVTHYLSLMAQNKGDTNK,33.0,3 +VILQEFVRGVQITNDIFSNK,33.0,3 +KELDEIAPVPDAFVPIIK,33.0,3 +SHRMPVITPAYPSMCATHNITESTK,33.0,3 +GVQITNDIFSNK,33.0,3 +MSNYEALLKFNR,33.0,3 +MCEYSKALHILLK,33.0,3 +YLLEASEESQKFIQDMYFK,33.0,3 +YPTIRTLEDASQFADFIK,33.0,3 +EKMDQLLSDLLR,33.0,3 +ELDEIAPVPDAFVPIIKIK,33.0,3 +EENTLVLGDIFQECSAKK,33.0,3 +AVSKEMVQYLASTTASIIK,33.0,3 +LDQPQVPLSLTLSDK,33.0,3 +GSDEQHLKWSGLVESK,33.0,3 +VQVLKILQELAQR,33.0,3 +EKVDIHIPCTEFVNLCR,33.0,3 +HVSDYVNDICFVK,33.0,3 +TINLLLSLTCK,33.0,3 +YTNVYTPTLLTAACYLNK,33.0,3 +HWARYTDGLFTLEDINLMER,33.0,3 +DLPIAQLIKHVSDYVNDICFVK,33.0,3 +KGLEKPEPIIVTVVSNDESYLFR,33.0,3 +YKFYLEITAYTR,33.0,3 +LIVEEHVSITANYTSGK,33.0,3 +LGVHGPGSDIDTLVVVPK,33.0,3 +IRTLPELHESNNISDK,33.0,3 +MPVITPAYPSMCATHNITESTKK,33.0,3 +LVTDENKEEESIK,33.0,3 +IDVQSLLGWGTDVYIK,33.0,3 +MSSQKVFGITGPVSTVGATAAENK,33.0,3 +IFLACLILSAK,33.0,3 +ITMKLLVTHYLSLMAQNK,33.0,3 +GLQEIQSCYPKFQISQFLNFHLK,33.0,3 +YGSHKTETALNALK,33.0,3 +EELVIRIAHK,33.0,3 +QRPSHELLSQLSFDQHYKIR,33.0,3 +DIPMPEFIIEGDTQLSFYFLPTHLK,33.0,3 +AYPSNSEYINPQHYYHNR,33.0,3 +TLNDSSPLNKHWAEYTDGLLILR,33.0,3 +HSNVQTPTLMATSVYLAK,33.0,3 +NVSIASDLSSATLVDSCNDLR,33.0,3 +AGGVLHDDENLWSFGK,33.0,3 +KEGSFETEQETANR,33.0,3 +FYLEITAYTRGSDEQHLK,33.0,3 +GLQEIQSCYPK,33.0,3 +TNSMIDIALPAPPLTKFINR,33.0,3 +SLQTLLSIAYPYELHNPPK,33.0,3 +ERAQESLNNFHK,33.0,3 +LPYNAVINPHIER,33.0,3 +HDNKENRPIPTIKPFNFSK,33.0,3 +EHMPIEINLLKPDDDELYLRIR,33.0,3 +DAPKAYLSTMYIGLDFNIENK,33.0,3 +DVTNIANNTVANTNYVRTVEK,33.0,3 +ENRPIPTIKPFNFSKARPVILK,33.0,3 +VDIHIPCTEFVNLCR,33.0,3 +VVPSSNYPTPPGSPGEK,33.0,3 +HVSDYVNDICFVKFNTQR,33.0,3 +EMVQYLASTTASIIKIK,33.0,3 +FYLEITAYTR,33.0,3 +HWAEYTDGLLILREVNTIER,33.0,3 +ILPRDATGLPSTIHR,33.0,3 +LPSLMTFITRLVR,33.0,3 +FSGISIDLICARLDQPQVPLSLTLSDK,33.0,3 +NVSIASDLSSATLVDSCNDLRR,33.0,3 +SPNPVSLTQLAQYYDDSTK,33.0,3 +VFNLALRFVK,33.0,3 +TVLVENYLKR,33.0,3 +GYDLPDEVFDENEKRPSK,33.0,3 +ISDKAGGVLHDDENLWSFGK,33.0,3 +ILQELAQRFVYEVSK,33.0,3 +LIKHSNVQTPTLMATSVYLAK,33.0,3 +IDVQSLLGWGTDVYIKLK,33.0,3 +VYAEYWNGDLSLHSMPGYGTDVVLK,33.0,3 +YKLGIGLAMCK,33.0,3 +QLLQLLNWDLR,33.0,3 +YTDGLFTLEDINLMER,33.0,3 +YETPLIELLKR,33.0,3 +SDAASGDNINGTTAAVDVN,33.0,3 +EEYMLTIKTINLLLSLTCK,33.0,3 +SLQTLLSIAYPYELHNPPKIQAK,33.0,3 +HLTRLPSLMTFITR,33.0,3 +QRPSHELLSQLSFDQHYK,33.0,3 +TLPELHESNNISDKFSPR,33.0,3 +EGSFETEQETANRVQVLK,33.0,3 +WAHRQRPSHELLSQLSFDQHYK,33.0,3 +ELDEIAPVPDAFVPIIK,33.0,3 +LRSIIPSNVYGIETTR,33.0,3 +TCAGTSPIRSNNR,33.0,3 +LNAIQRLPYNAVINPHIER,33.0,3 +MPVITPAYPSMCATHNITESTK,33.0,3 +HRIFLGCLILAAK,33.0,3 +NTYEATMKHYIR,33.0,3 +AQESLNNFHK,33.0,3 +EHMPIEINLLKPDDDELYLR,33.0,3 +VVPSSNYPTPPGSPGEKHLTR,33.0,3 +WNDNVNRQSWDLEQIMSQHGF,33.0,3 +TNSMIDIALPAPPLTK,33.0,3 +VNTEDLILDLQPLLEPIK,33.0,3 +MIGILHRDLPIAQLIK,33.0,3 +HVTREDFFTVFDSLLR,33.0,3 +TLPELHESNNISDK,33.0,3 +LLVTHYLSLMAQNK,33.0,3 +AYLSTMYIGLDFNIENK,33.0,3 +EGSFETEQETANR,33.0,3 +RSNLSNYSNR,33.0,3 +DAGGKIFTYGSYR,33.0,3 +IKFSGISIDLICAR,33.0,3 +LPGLQTVSIYDEVHSHTK,33.0,3 +GYDLPDEVFDENEK,33.0,3 +YLLGEILRNTYEATMK,33.0,3 +YLLEASEESQK,33.0,3 +AGGVLHDDENLWSFGKSK,33.0,3 +ALHILLKSPVTDDIIK,33.0,3 +FSPRTYNIDSK,33.0,3 +NFSAQEKDIVNK,33.0,3 +GVQITNDIFSNKK,33.0,3 +ALNGTRVTDEILELVPKPNVFR,33.0,3 +FQISQFLNFHLK,33.0,3 +NMSDGMARDAGGK,33.0,3 +EMVQYLASTTASIIK,33.0,3 +HSNVQTPTLMATSVYLAKLR,33.0,3 +MDQLLSDLLR,33.0,3 +LLVMKLEVLAGIK,33.0,3 +HWAEYTDGLLILR,33.0,3 +ARPVILKTGLNK,33.0,3 +KYLLEASEESQK,33.0,3 +EENTLVLGDIFQECSAK,33.0,3 +VTDEILELVPKPNVFRIALR,33.0,3 +TYLELFGGKIDVQSLLGWGTDVYIK,33.0,3 +LPGLQTVSIYDEVHSHTKYNSK,33.0,3 +QRNVSIASDLSSATLVDSCNDLR,33.0,3 +DVTNIANNTVANTNYVR,33.0,3 +GLEKPEPIIVTVVSNDESYLFRISDK,33.0,3 +AVYANIFGFPGGVAWAMLVAR,33.0,3 +RAVYANIFGFPGGVAWAMLVAR,33.0,3 +FLTDTTLRVVPSSNYPTPPGSPGEK,33.0,3 +SIIPSNVYGIETTR,33.0,3 +MSKYQINCIR,33.0,3 +ICQLYPNACSAVILNR,33.0,3 +SNLSNYSNRIR,33.0,3 +SWANLFEKNDFFFR,33.0,3 +TVEKWNDNVNR,33.0,3 +INMMMSMNRR,33.0,3 +RLIVEEHVSITANYTSGK,33.0,3 +SSSNMSIPSLASTSTLSTLESR,33.0,3 +IFLGCLILAAKTLNDSSPLNK,33.0,3 +LGVHGPGSDIDTLVVVPKHVTR,33.0,3 +TYNIDSKHDNK,33.0,3 +LPYNAVINPHIERTNSLYLK,33.0,3 +VTDEILELVPKPNVFR,33.0,3 +TNSLYLKSLQTLLSIAYPYELHNPPK,33.0,3 +LNDSLIQELKK,33.0,3