Mercurial > repos > jjohnson > find_in_reference

diff find_in_reference.xml @ 3:2429b413d90a draft default tip

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"planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/find_in_reference commit 074e95e1b598ec41f0e18a2798b00cf65e9b399e-dirty"
author jjohnson
date Thu, 12 May 2022 19:30:54 +0000
parents c4fd2ea4f988
children
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--- a/find_in_reference.xml	Thu Nov 13 14:09:50 2014 -0600
+++ b/find_in_reference.xml	Thu May 12 19:30:54 2022 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="find_in_reference" name="find in reference" version="0.0.3">
+<tool id="find_in_reference" name="find in reference" version="0.1.0">
   <description>filter peptides that are present in proteins</description>
   <command interpreter="python">find_in_reference.py  --input "$input" 
   --reference "$reference" 
@@ -106,6 +106,11 @@
     <test>
       <param name="input" value="human_proteins.tabular" ftype="tabular" dbkey="hg19"/>
       <param name="reference" value="human_peptides.tabular" ftype="tabular" dbkey="hg19"/>
+      <conditional name="column">
+          <param name="set" value="yes"/>
+          <param name="input_column" value="2"/>
+          <param name="reference_column" value="2"/>
+      </conditional>
       <param name="reverse_find" value="True"/>
       <param name="outputs" value="found"/>
       <output name="found" file="found_proteins.tabular"/>