Mercurial > repos > jjohnson > gffread
diff test-data/Homo_sapiens.GRCh37_19.71.gff3 @ 0:d0d6fc2004be draft default tip
Uploaded
| author | jjohnson |
|---|---|
| date | Mon, 05 Jan 2015 12:53:44 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Homo_sapiens.GRCh37_19.71.gff3 Mon Jan 05 12:53:44 2015 -0500 @@ -0,0 +1,313 @@ +# gffread test-data/Homo_sapiens.GRCh37_19.71.gtf -o test-data/Homo_sapiens.GRCh37_19.71.gff3 +##gff-version 3 +19 snRNA transcript 223158 223261 . - . ID=ENST00000410397;geneID=ENSG00000222329;gene_name=U6 +19 snRNA exon 223158 223261 . - . Parent=ENST00000410397 +19 unprocessed_pseudogene transcript 229640 230165 . - . ID=ENST00000587910;geneID=ENSG00000267600;gene_name=AC098474.1 +19 unprocessed_pseudogene exon 229640 229709 . - . Parent=ENST00000587910 +19 unprocessed_pseudogene exon 230084 230165 . - . Parent=ENST00000587910 +19 processed_pseudogene transcript 239145 239247 . - . ID=ENST00000588755;geneID=ENSG00000267305;gene_name=CTD-3113P16.7 +19 processed_pseudogene exon 239145 239247 . - . Parent=ENST00000588755 +19 processed_pseudogene transcript 279495 280170 . + . ID=ENST00000589981;geneID=ENSG00000267447;gene_name=VN2R11P +19 processed_pseudogene exon 279495 280170 . + . Parent=ENST00000589981 +19 protein_coding mRNA 281043 291386 . - . ID=ENST00000269812;geneID=ENSG00000141934;gene_name=PPAP2C +19 protein_coding exon 281043 281537 . - . Parent=ENST00000269812 +19 protein_coding exon 282134 282310 . - . Parent=ENST00000269812 +19 protein_coding exon 282752 282809 . - . Parent=ENST00000269812 +19 protein_coding exon 287474 287751 . - . Parent=ENST00000269812 +19 protein_coding exon 288020 288171 . - . Parent=ENST00000269812 +19 protein_coding exon 291285 291386 . - . Parent=ENST00000269812 +19 protein_coding CDS 281391 281537 . - 0 Parent=ENST00000269812 +19 protein_coding CDS 282134 282310 . - 0 Parent=ENST00000269812 +19 protein_coding CDS 282752 282809 . - 1 Parent=ENST00000269812 +19 protein_coding CDS 287474 287751 . - 0 Parent=ENST00000269812 +19 protein_coding CDS 288020 288171 . - 2 Parent=ENST00000269812 +19 protein_coding CDS 291285 291336 . - 0 Parent=ENST00000269812 +19 protein_coding mRNA 281345 291393 . - . ID=ENST00000434325;geneID=ENSG00000141934;gene_name=PPAP2C +19 protein_coding exon 281345 281537 . - . Parent=ENST00000434325 +19 protein_coding exon 282134 282310 . - . Parent=ENST00000434325 +19 protein_coding exon 282752 282809 . - . Parent=ENST00000434325 +19 protein_coding exon 287474 287751 . - . Parent=ENST00000434325 +19 protein_coding exon 288020 288171 . - . Parent=ENST00000434325 +19 protein_coding exon 291326 291393 . - . Parent=ENST00000434325 +19 protein_coding CDS 281391 281537 . - 0 Parent=ENST00000434325 +19 protein_coding CDS 282134 282310 . - 0 Parent=ENST00000434325 +19 protein_coding CDS 282752 282809 . - 1 Parent=ENST00000434325 +19 protein_coding CDS 287474 287751 . - 0 Parent=ENST00000434325 +19 protein_coding CDS 288020 288055 . - 0 Parent=ENST00000434325 +19 protein_coding mRNA 281388 291200 . - . ID=ENST00000327790;geneID=ENSG00000141934;gene_name=PPAP2C +19 protein_coding exon 281388 281537 . - . Parent=ENST00000327790 +19 protein_coding exon 282134 282310 . - . Parent=ENST00000327790 +19 protein_coding exon 282752 282809 . - . Parent=ENST00000327790 +19 protein_coding exon 287474 287751 . - . Parent=ENST00000327790 +19 protein_coding exon 288020 288171 . - . Parent=ENST00000327790 +19 protein_coding exon 290952 291200 . - . Parent=ENST00000327790 +19 protein_coding CDS 281391 281537 . - 0 Parent=ENST00000327790 +19 protein_coding CDS 282134 282310 . - 0 Parent=ENST00000327790 +19 protein_coding CDS 282752 282809 . - 1 Parent=ENST00000327790 +19 protein_coding CDS 287474 287751 . - 0 Parent=ENST00000327790 +19 protein_coding CDS 288020 288171 . - 2 Parent=ENST00000327790 +19 protein_coding CDS 290952 291066 . - 0 Parent=ENST00000327790 +19 protein_coding mRNA 281991 287636 . - . ID=ENST00000586998;geneID=ENSG00000141934;gene_name=PPAP2C +19 protein_coding exon 281991 282310 . - . Parent=ENST00000586998 +19 protein_coding exon 282752 282809 . - . Parent=ENST00000586998 +19 protein_coding exon 287474 287636 . - . Parent=ENST00000586998 +19 protein_coding CDS 282125 282310 . - 0 Parent=ENST00000586998 +19 protein_coding CDS 282752 282809 . - 1 Parent=ENST00000586998 +19 protein_coding CDS 287474 287636 . - 2 Parent=ENST00000586998 +19 retained_intron transcript 287161 288530 . - . ID=ENST00000589672;geneID=ENSG00000141934;gene_name=PPAP2C +19 retained_intron exon 287161 287751 . - . Parent=ENST00000589672 +19 retained_intron exon 288020 288530 . - . Parent=ENST00000589672 +19 protein_coding mRNA 287474 291382 . - . ID=ENST00000591572;geneID=ENSG00000141934;gene_name=PPAP2C +19 protein_coding exon 287474 287751 . - . Parent=ENST00000591572 +19 protein_coding exon 288020 288189 . - . Parent=ENST00000591572 +19 protein_coding exon 291285 291382 . - . Parent=ENST00000591572 +19 protein_coding CDS 287474 287751 . - 0 Parent=ENST00000591572 +19 protein_coding CDS 288020 288189 . - 2 Parent=ENST00000591572 +19 protein_coding CDS 291285 291336 . - 0 Parent=ENST00000591572 +19 antisense transcript 305573 306467 . + . ID=ENST00000591533;geneID=ENSG00000267124;gene_name=CTD-3113P16.5 +19 antisense exon 305573 305703 . + . Parent=ENST00000591533 +19 antisense exon 306057 306467 . + . Parent=ENST00000591533 +19 protein_coding mRNA 305575 344793 . - . ID=ENST00000264819;geneID=ENSG00000105556;gene_name=MIER2 +19 protein_coding exon 305575 306711 . - . Parent=ENST00000264819 +19 protein_coding exon 307119 307536 . - . Parent=ENST00000264819 +19 protein_coding exon 308577 308665 . - . Parent=ENST00000264819 +19 protein_coding exon 308801 308925 . - . Parent=ENST00000264819 +19 protein_coding exon 311845 311939 . - . Parent=ENST00000264819 +19 protein_coding exon 312191 312272 . - . Parent=ENST00000264819 +19 protein_coding exon 313492 313643 . - . Parent=ENST00000264819 +19 protein_coding exon 325635 325704 . - . Parent=ENST00000264819 +19 protein_coding exon 326507 326598 . - . Parent=ENST00000264819 +19 protein_coding exon 327133 327256 . - . Parent=ENST00000264819 +19 protein_coding exon 327864 327989 . - . Parent=ENST00000264819 +19 protein_coding exon 334400 334542 . - . Parent=ENST00000264819 +19 protein_coding exon 336083 336173 . - . Parent=ENST00000264819 +19 protein_coding exon 344774 344793 . - . Parent=ENST00000264819 +19 protein_coding CDS 306693 306711 . - 1 Parent=ENST00000264819 +19 protein_coding CDS 307119 307536 . - 2 Parent=ENST00000264819 +19 protein_coding CDS 308577 308665 . - 1 Parent=ENST00000264819 +19 protein_coding CDS 308801 308925 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 311845 311939 . - 2 Parent=ENST00000264819 +19 protein_coding CDS 312191 312272 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 313492 313643 . - 2 Parent=ENST00000264819 +19 protein_coding CDS 325635 325704 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 326507 326598 . - 2 Parent=ENST00000264819 +19 protein_coding CDS 327133 327256 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 327864 327989 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 334400 334542 . - 2 Parent=ENST00000264819 +19 protein_coding CDS 336083 336173 . - 0 Parent=ENST00000264819 +19 protein_coding CDS 344774 344782 . - 0 Parent=ENST00000264819 +19 antisense transcript 305579 325706 . + . ID=ENST00000589092;geneID=ENSG00000267124;gene_name=CTD-3113P16.5 +19 antisense exon 305579 305934 . + . Parent=ENST00000589092 +19 antisense exon 325624 325706 . + . Parent=ENST00000589092 +19 retained_intron transcript 326607 336178 . - . ID=ENST00000586994;geneID=ENSG00000105556;gene_name=MIER2 +19 retained_intron exon 326607 327256 . - . Parent=ENST00000586994 +19 retained_intron exon 327864 327989 . - . Parent=ENST00000586994 +19 retained_intron exon 334400 334542 . - . Parent=ENST00000586994 +19 retained_intron exon 336083 336178 . - . Parent=ENST00000586994 +19 retained_intron transcript 327864 340599 . - . ID=ENST00000592722;geneID=ENSG00000105556;gene_name=MIER2 +19 retained_intron exon 327864 327989 . - . Parent=ENST00000592722 +19 retained_intron exon 330264 330380 . - . Parent=ENST00000592722 +19 retained_intron exon 334400 334542 . - . Parent=ENST00000592722 +19 retained_intron exon 336083 336173 . - . Parent=ENST00000592722 +19 retained_intron exon 340514 340599 . - . Parent=ENST00000592722 +19 retained_intron transcript 334115 344798 . - . ID=ENST00000587966;geneID=ENSG00000105556;gene_name=MIER2 +19 retained_intron exon 334115 334542 . - . Parent=ENST00000587966 +19 retained_intron exon 344774 344798 . - . Parent=ENST00000587966 +19 protein_coding mRNA 361750 376013 . - . ID=ENST00000342640;geneID=ENSG00000105549;gene_name=THEG +19 protein_coding exon 361750 362426 . - . Parent=ENST00000342640 +19 protein_coding exon 367065 367224 . - . Parent=ENST00000342640 +19 protein_coding exon 371205 371322 . - . Parent=ENST00000342640 +19 protein_coding exon 372631 372700 . - . Parent=ENST00000342640 +19 protein_coding exon 373470 373531 . - . Parent=ENST00000342640 +19 protein_coding exon 373940 374011 . - . Parent=ENST00000342640 +19 protein_coding exon 374299 374421 . - . Parent=ENST00000342640 +19 protein_coding exon 375663 376013 . - . Parent=ENST00000342640 +19 protein_coding CDS 362203 362426 . - 2 Parent=ENST00000342640 +19 protein_coding CDS 367065 367224 . - 0 Parent=ENST00000342640 +19 protein_coding CDS 371205 371322 . - 1 Parent=ENST00000342640 +19 protein_coding CDS 372631 372700 . - 2 Parent=ENST00000342640 +19 protein_coding CDS 373470 373531 . - 1 Parent=ENST00000342640 +19 protein_coding CDS 373940 374011 . - 1 Parent=ENST00000342640 +19 protein_coding CDS 374299 374421 . - 1 Parent=ENST00000342640 +19 protein_coding CDS 375663 375970 . - 0 Parent=ENST00000342640 +19 retained_intron transcript 362058 374620 . - . ID=ENST00000530711;geneID=ENSG00000105549;gene_name=THEG +19 retained_intron exon 362058 362426 . - . Parent=ENST00000530711 +19 retained_intron exon 367065 367224 . - . Parent=ENST00000530711 +19 retained_intron exon 374299 374620 . - . Parent=ENST00000530711 +19 protein_coding mRNA 362200 375970 . - . ID=ENST00000346878;geneID=ENSG00000105549;gene_name=THEG +19 protein_coding exon 362200 362426 . - . Parent=ENST00000346878 +19 protein_coding exon 367065 367224 . - . Parent=ENST00000346878 +19 protein_coding exon 371205 371322 . - . Parent=ENST00000346878 +19 protein_coding exon 372631 372700 . - . Parent=ENST00000346878 +19 protein_coding exon 373470 373531 . - . Parent=ENST00000346878 +19 protein_coding exon 374299 374421 . - . Parent=ENST00000346878 +19 protein_coding exon 375663 375970 . - . Parent=ENST00000346878 +19 protein_coding CDS 362203 362426 . - 2 Parent=ENST00000346878 +19 protein_coding CDS 367065 367224 . - 0 Parent=ENST00000346878 +19 protein_coding CDS 371205 371322 . - 1 Parent=ENST00000346878 +19 protein_coding CDS 372631 372700 . - 2 Parent=ENST00000346878 +19 protein_coding CDS 373470 373531 . - 1 Parent=ENST00000346878 +19 protein_coding CDS 374299 374421 . - 1 Parent=ENST00000346878 +19 protein_coding CDS 375663 375970 . - 0 Parent=ENST00000346878 +19 retained_intron transcript 367202 374249 . - . ID=ENST00000528213;geneID=ENSG00000105549;gene_name=THEG +19 retained_intron exon 367202 367224 . - . Parent=ENST00000528213 +19 retained_intron exon 371205 371322 . - . Parent=ENST00000528213 +19 retained_intron exon 372631 372700 . - . Parent=ENST00000528213 +19 retained_intron exon 373470 373531 . - . Parent=ENST00000528213 +19 retained_intron exon 373940 374249 . - . Parent=ENST00000528213 +19 processed_transcript transcript 397589 398941 . + . ID=ENST00000591757;geneID=ENSG00000267443;gene_name=AC010641.1 +19 processed_transcript exon 397589 397633 . + . Parent=ENST00000591757 +19 processed_transcript exon 398690 398941 . + . Parent=ENST00000591757 +19 protein_coding mRNA 405445 409139 . - . ID=ENST00000332235;geneID=ENSG00000183186;gene_name=C2CD4C +19 protein_coding exon 405445 408401 . - . Parent=ENST00000332235 +19 protein_coding exon 409006 409139 . - . Parent=ENST00000332235 +19 protein_coding CDS 407099 408361 . - 0 Parent=ENST00000332235 +19 retained_intron transcript 416583 419879 . - . ID=ENST00000587423;geneID=ENSG00000129946;gene_name=SHC2 +19 retained_intron exon 416583 417322 . - . Parent=ENST00000587423 +19 retained_intron exon 418923 419879 . - . Parent=ENST00000587423 +19 retained_intron transcript 416583 422828 . - . ID=ENST00000588376;geneID=ENSG00000129946;gene_name=SHC2 +19 retained_intron exon 416583 417322 . - . Parent=ENST00000588376 +19 retained_intron exon 418923 419056 . - . Parent=ENST00000588376 +19 retained_intron exon 422146 422828 . - . Parent=ENST00000588376 +19 protein_coding mRNA 416593 460996 . - . ID=ENST00000264554;geneID=ENSG00000129946;gene_name=SHC2 +19 protein_coding exon 416593 417322 . - . Parent=ENST00000264554 +19 protein_coding exon 418923 419056 . - . Parent=ENST00000264554 +19 protein_coding exon 422146 422456 . - . Parent=ENST00000264554 +19 protein_coding exon 425097 425231 . - . Parent=ENST00000264554 +19 protein_coding exon 430684 430747 . - . Parent=ENST00000264554 +19 protein_coding exon 434709 434865 . - . Parent=ENST00000264554 +19 protein_coding exon 436165 436291 . - . Parent=ENST00000264554 +19 protein_coding exon 436380 436431 . - . Parent=ENST00000264554 +19 protein_coding exon 436630 436683 . - . Parent=ENST00000264554 +19 protein_coding exon 438718 438837 . - . Parent=ENST00000264554 +19 protein_coding exon 438970 439030 . - . Parent=ENST00000264554 +19 protein_coding exon 440862 440932 . - . Parent=ENST00000264554 +19 protein_coding exon 460529 460996 . - . Parent=ENST00000264554 +19 protein_coding CDS 418931 419056 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 422146 422456 . - 2 Parent=ENST00000264554 +19 protein_coding CDS 425097 425231 . - 2 Parent=ENST00000264554 +19 protein_coding CDS 430684 430747 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 434709 434865 . - 1 Parent=ENST00000264554 +19 protein_coding CDS 436165 436291 . - 2 Parent=ENST00000264554 +19 protein_coding CDS 436380 436431 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 436630 436683 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 438718 438837 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 438970 439030 . - 1 Parent=ENST00000264554 +19 protein_coding CDS 440862 440932 . - 0 Parent=ENST00000264554 +19 protein_coding CDS 460529 460996 . - 0 Parent=ENST00000264554 +19 retained_intron transcript 416609 441384 . - . ID=ENST00000589922;geneID=ENSG00000129946;gene_name=SHC2 +19 retained_intron exon 416609 417322 . - . Parent=ENST00000589922 +19 retained_intron exon 418923 419056 . - . Parent=ENST00000589922 +19 retained_intron exon 422146 422456 . - . Parent=ENST00000589922 +19 retained_intron exon 425097 425231 . - . Parent=ENST00000589922 +19 retained_intron exon 430684 430747 . - . Parent=ENST00000589922 +19 retained_intron exon 434709 434865 . - . Parent=ENST00000589922 +19 retained_intron exon 436165 436291 . - . Parent=ENST00000589922 +19 retained_intron exon 436380 436683 . - . Parent=ENST00000589922 +19 retained_intron exon 438718 438837 . - . Parent=ENST00000589922 +19 retained_intron exon 438970 439030 . - . Parent=ENST00000589922 +19 retained_intron exon 440862 441384 . - . Parent=ENST00000589922 +19 nonsense_mediated_decay mRNA 417200 436258 . - . ID=ENST00000590170;geneID=ENSG00000129946;gene_name=SHC2 +19 nonsense_mediated_decay exon 417200 417322 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay exon 418923 419056 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay exon 422146 422379 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay exon 430684 430747 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay exon 434709 434865 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay exon 436165 436258 . - . Parent=ENST00000590170 +19 nonsense_mediated_decay CDS 434765 434865 . - 2 Parent=ENST00000590170 +19 nonsense_mediated_decay CDS 436165 436258 . - 0 Parent=ENST00000590170 +19 processed_transcript transcript 417200 436258 . - . ID=ENST00000591948;geneID=ENSG00000129946;gene_name=SHC2 +19 processed_transcript exon 417200 417322 . - . Parent=ENST00000591948 +19 processed_transcript exon 418923 419056 . - . Parent=ENST00000591948 +19 processed_transcript exon 422146 422379 . - . Parent=ENST00000591948 +19 processed_transcript exon 430684 430747 . - . Parent=ENST00000591948 +19 processed_transcript exon 434709 434865 . - . Parent=ENST00000591948 +19 processed_transcript exon 436165 436258 . - . Parent=ENST00000591948 +19 nonsense_mediated_decay mRNA 434702 460571 . - . ID=ENST00000590222;geneID=ENSG00000129946;gene_name=SHC2 +19 nonsense_mediated_decay exon 434702 434865 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 436165 436291 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 436380 436431 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 436630 436683 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 438718 438837 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 438970 439030 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 439233 439491 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 440862 440932 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay exon 460529 460571 . - . Parent=ENST00000590222 +19 nonsense_mediated_decay CDS 439401 439491 . - 1 Parent=ENST00000590222 +19 nonsense_mediated_decay CDS 440862 440932 . - 0 Parent=ENST00000590222 +19 nonsense_mediated_decay CDS 460529 460571 . - 1 Parent=ENST00000590222 +19 retained_intron transcript 435771 436534 . - . ID=ENST00000591388;geneID=ENSG00000129946;gene_name=SHC2 +19 retained_intron exon 435771 435961 . - . Parent=ENST00000591388 +19 retained_intron exon 436165 436291 . - . Parent=ENST00000591388 +19 retained_intron exon 436380 436534 . - . Parent=ENST00000591388 +19 processed_transcript transcript 435779 439031 . - . ID=ENST00000590113;geneID=ENSG00000129946;gene_name=SHC2 +19 processed_transcript exon 435779 435961 . - . Parent=ENST00000590113 +19 processed_transcript exon 436165 436291 . - . Parent=ENST00000590113 +19 processed_transcript exon 436380 436431 . - . Parent=ENST00000590113 +19 processed_transcript exon 436630 436683 . - . Parent=ENST00000590113 +19 processed_transcript exon 438718 438837 . - . Parent=ENST00000590113 +19 processed_transcript exon 438970 439031 . - . Parent=ENST00000590113 +19 rRNA transcript 453134 453245 . + . ID=ENST00000516730;geneID=ENSG00000252539;gene_name=RNA5SP462 +19 rRNA exon 453134 453245 . + . Parent=ENST00000516730 +19 protein_coding mRNA 463346 474983 . - . ID=ENST00000315489;geneID=ENSG00000181781;gene_name=ODF3L2 +19 protein_coding exon 463346 464364 . - . Parent=ENST00000315489 +19 protein_coding exon 467649 467762 . - . Parent=ENST00000315489 +19 protein_coding exon 472394 472501 . - . Parent=ENST00000315489 +19 protein_coding exon 474621 474983 . - . Parent=ENST00000315489 +19 protein_coding CDS 463847 464364 . - 2 Parent=ENST00000315489 +19 protein_coding CDS 467649 467762 . - 2 Parent=ENST00000315489 +19 protein_coding CDS 472394 472501 . - 2 Parent=ENST00000315489 +19 protein_coding CDS 474621 474747 . - 0 Parent=ENST00000315489 +19 protein_coding mRNA 463467 474880 . - . ID=ENST00000382696;geneID=ENSG00000181781;gene_name=ODF3L2 +19 protein_coding exon 463467 464364 . - . Parent=ENST00000382696 +19 protein_coding exon 467649 467762 . - . Parent=ENST00000382696 +19 protein_coding exon 474621 474880 . - . Parent=ENST00000382696 +19 protein_coding CDS 463847 464364 . - 2 Parent=ENST00000382696 +19 protein_coding CDS 467649 467762 . - 2 Parent=ENST00000382696 +19 protein_coding CDS 474621 474747 . - 0 Parent=ENST00000382696 +19 retained_intron transcript 464146 472631 . - . ID=ENST00000591681;geneID=ENSG00000181781;gene_name=ODF3L2 +19 retained_intron exon 464146 464364 . - . Parent=ENST00000591681 +19 retained_intron exon 467649 467762 . - . Parent=ENST00000591681 +19 retained_intron exon 472394 472631 . - . Parent=ENST00000591681 +19 processed_transcript transcript 489176 505342 . + . ID=ENST00000587541;geneID=ENSG00000099866;gene_name=MADCAM1 +19 processed_transcript exon 489176 490039 . + . Parent=ENST00000587541 +19 processed_transcript exon 501669 501929 . + . Parent=ENST00000587541 +19 processed_transcript exon 504745 505342 . + . Parent=ENST00000587541 +19 antisense transcript 490046 507813 . - . ID=ENST00000592413;geneID=ENSG00000266933;gene_name=AC005775.2 +19 antisense exon 490046 490353 . - . Parent=ENST00000592413 +19 antisense exon 501541 501624 . - . Parent=ENST00000592413 +19 antisense exon 507376 507813 . - . Parent=ENST00000592413 +19 protein_coding mRNA 496454 505207 . + . ID=ENST00000346144;geneID=ENSG00000099866;gene_name=MADCAM1 +19 protein_coding exon 496454 496551 . + . Parent=ENST00000346144 +19 protein_coding exon 497833 498117 . + . Parent=ENST00000346144 +19 protein_coding exon 498496 498825 . + . Parent=ENST00000346144 +19 protein_coding exon 504745 505207 . + . Parent=ENST00000346144 +19 protein_coding CDS 496500 496551 . + 0 Parent=ENST00000346144 +19 protein_coding CDS 497833 498117 . + 2 Parent=ENST00000346144 +19 protein_coding CDS 498496 498825 . + 2 Parent=ENST00000346144 +19 protein_coding CDS 504745 504963 . + 2 Parent=ENST00000346144 +19 protein_coding mRNA 496454 505347 . + . ID=ENST00000215637;geneID=ENSG00000099866;gene_name=MADCAM1 +19 protein_coding exon 496454 496551 . + . Parent=ENST00000215637 +19 protein_coding exon 497833 498117 . + . Parent=ENST00000215637 +19 protein_coding exon 498496 498825 . + . Parent=ENST00000215637 +19 protein_coding exon 501669 501929 . + . Parent=ENST00000215637 +19 protein_coding exon 504745 505347 . + . Parent=ENST00000215637 +19 protein_coding CDS 496500 496551 . + 0 Parent=ENST00000215637 +19 protein_coding CDS 497833 498117 . + 2 Parent=ENST00000215637 +19 protein_coding CDS 498496 498825 . + 2 Parent=ENST00000215637 +19 protein_coding CDS 501669 501929 . + 2 Parent=ENST00000215637 +19 protein_coding CDS 504745 504963 . + 2 Parent=ENST00000215637 +19 protein_coding mRNA 496500 504965 . + . ID=ENST00000382683;geneID=ENSG00000099866;gene_name=MADCAM1 +19 protein_coding exon 496500 496551 . + . Parent=ENST00000382683 +19 protein_coding exon 498496 498825 . + . Parent=ENST00000382683 +19 protein_coding exon 504745 504965 . + . Parent=ENST00000382683 +19 protein_coding CDS 496500 496551 . + 0 Parent=ENST00000382683 +19 protein_coding CDS 498496 498825 . + 2 Parent=ENST00000382683 +19 protein_coding CDS 504745 504963 . + 2 Parent=ENST00000382683 +19 protein_coding mRNA 507299 519654 . + . ID=ENST00000359315;geneID=ENSG00000141933;gene_name=TPGS1 +19 protein_coding exon 507299 507844 . + . Parent=ENST00000359315 +19 protein_coding exon 518889 519654 . + . Parent=ENST00000359315 +19 protein_coding CDS 507507 507844 . + 0 Parent=ENST00000359315 +19 protein_coding CDS 518889 519421 . + 1 Parent=ENST00000359315 +19 retained_intron transcript 507500 510372 . + . ID=ENST00000588278;geneID=ENSG00000141933;gene_name=TPGS1 +19 retained_intron exon 507500 510372 . + . Parent=ENST00000588278