Mercurial > repos > jjohnson > gmap
comparison gmap_build.xml @ 8:a89fec682254
gmap/gsnap updated to version 2011-11-30
author | Jim Johnson <jj@umn.edu> |
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date | Thu, 08 Dec 2011 11:00:46 -0600 |
parents | 561503a442f0 |
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7:561503a442f0 | 8:a89fec682254 |
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1 <tool id="gmap_build" name="GMAP Build" version="2.0.0"> | 1 <tool id="gmap_build" name="GMAP Build" version="2.0.0"> |
2 <description>a database genome index for GMAP and GSNAP</description> | 2 <description>a database genome index for GMAP and GSNAP</description> |
3 <requirements> | 3 <requirements> |
4 <requirement type="binary">gmap_build</requirement> | 4 <requirement type="binary">gmap_build</requirement> |
5 <!-- proposed tag for added datatype dependencies --> | |
6 <requirement type="datatype">gmapdb</requirement> | |
7 <requirement type="datatype">gmap_snps</requirement> | |
8 </requirements> | 5 </requirements> |
9 <version_string>gmap --version</version_string> | 6 <version_string>gmap --version</version_string> |
10 <command interpreter="command"> /bin/bash $shscript 2>1 1> $output </command> | 7 <command interpreter="command"> /bin/bash $shscript 2>1 1> $output </command> |
11 <inputs> | 8 <inputs> |
12 <!-- Name for this gmapdb --> | 9 <!-- Name for this gmapdb --> |