Mercurial > repos > jjohnson > gmap
comparison iit_store.xml @ 8:a89fec682254
gmap/gsnap updated to version 2011-11-30
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 08 Dec 2011 11:00:46 -0600 |
| parents | 561503a442f0 |
| children |
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| 7:561503a442f0 | 8:a89fec682254 |
|---|---|
| 1 <tool id="gmap_iit_store" name="GMAP IIT" version="2.0.0"> | 1 <tool id="gmap_iit_store" name="GMAP IIT" version="2.0.0"> |
| 2 <description>Create a map store for known genes or SNPs</description> | 2 <description>Create a map store for known genes or SNPs</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="binary">iit_store</requirement> | 4 <requirement type="binary">iit_store</requirement> |
| 5 <!-- proposed tag for added datatype dependencies --> | |
| 6 <requirement type="datatype">gmap_annotation</requirement> | |
| 7 <requirement type="datatype">gmap_snps</requirement> | |
| 8 <requirement type="datatype">iit</requirement> | |
| 9 <requirement type="datatype">splicesites.iit</requirement> | |
| 10 <requirement type="datatype">introns.iit</requirement> | |
| 11 <requirement type="datatype">snps.iit</requirement> | |
| 12 </requirements> | 5 </requirements> |
| 13 <version_string>iit_store --version</version_string> | 6 <version_string>iit_store --version</version_string> |
| 14 <command interpreter="command"> /bin/bash $shscript 2> $log </command> | 7 <command interpreter="command"> /bin/bash $shscript 2> $log </command> |
| 15 <inputs> | 8 <inputs> |
| 16 <!-- Input data --> | 9 <!-- Input data --> |