annotate mothur/lib/galaxy/datatypes/converters/ref_to_seq_taxonomy_converter.xml @ 36:040410b8167e default tip

Fixed reference to legacy blast repository in tool_dependencies.xml. Updated README with author information.
author galaxyuser <galaxy_user@agr.g.ca>
date Mon, 10 Nov 2014 15:40:02 -0500
parents 57df76d861e4
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
17
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
1 <tool id="CONVERTER_ref_to_seq_taxomony" name="Convert Ref taxonomy to Seq Taxonomy" version="1.0.0">
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
2 <description>converts 2 or 3 column sequence taxonomy file to a 2 column mothur taxonomy_outline format</description>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
3 <command interpreter="python">ref_to_seq_taxonomy_converter.py $input $output</command>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
4 <inputs>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
5 <param name="input" type="data" format="ref.taxonomy" label="a Sequence Taxomony file"/>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
6 </inputs>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
7 <outputs>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
8 <data name="output" format="seq.taxonomy"/>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
9 </outputs>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
10 <help>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
11 </help>
57df76d861e4 Modifications for ToolShed proprietary data types
Jim Johnson <jj@umn.edu>
parents:
diff changeset
12 </tool>