Mercurial > repos > jjohnson > mothur_toolsuite
comparison mothur/tools/mothur/get.seqs.xml @ 4:5265aa9067e0
set output formats to match input formats
| author | jjohnson |
|---|---|
| date | Wed, 08 Jun 2011 15:02:44 -0500 |
| parents | e990ac8a0f58 |
| children | 7bfe1f843858 |
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| 3:b849cd7e132a | 4:5265aa9067e0 |
|---|---|
| 51 <param name="dups" type="boolean" truevalue="" falsevalue="--dups=false" checked="true" label="dups - Apply to duplicates"/> | 51 <param name="dups" type="boolean" truevalue="" falsevalue="--dups=false" checked="true" label="dups - Apply to duplicates"/> |
| 52 </inputs> | 52 </inputs> |
| 53 <outputs> | 53 <outputs> |
| 54 <data format="html" name="logfile" label="${tool.name} on ${on_string}: logfile" /> | 54 <data format="html" name="logfile" label="${tool.name} on ${on_string}: logfile" /> |
| 55 <!-- format should be set to match input --> | 55 <!-- format should be set to match input --> |
| 56 <data format="fasta" name="fasta_out" label="${tool.name} on ${on_string}: pick.fasta"> | 56 <data format_source="fasta_in" name="fasta_out" label="${tool.name} on ${on_string}: pick.fasta"> |
| 57 <filter>fasta_in != None</filter> | 57 <filter>fasta_in != None</filter> |
| 58 </data> | 58 </data> |
| 59 <!-- format should be set to match input --> | 59 <!-- format should be set to match input --> |
| 60 <data format="qual" name="qfile_out" label="${tool.name} on ${on_string}: pick.qfile"> | 60 <data format_source="qfile_in" name="qfile_out" label="${tool.name} on ${on_string}: pick.qfile"> |
| 61 <filter>qfile_in != None</filter> | 61 <filter>qfile_in != None</filter> |
| 62 </data> | 62 </data> |
| 63 <data format="names" name="name_out" label="${tool.name} on ${on_string}: pick.names"> | 63 <data format="names" name="name_out" label="${tool.name} on ${on_string}: pick.names"> |
| 64 <filter>name_in != None</filter> | 64 <filter>name_in != None</filter> |
| 65 </data> | 65 </data> |