comparison mothur/tools/mothur/rarefaction.shared.xml @ 19:d86987601022

Move calc options in individual tools and remove tool-data/mothur_calculators.loc
author Jim Johnson <jj@umn.edu>
date Tue, 17 Jan 2012 14:16:44 -0600
parents 7bfe1f843858
children bfbaf823be4c
comparison
equal deleted inserted replaced
18:697156806162 19:d86987601022
41 </options> 41 </options>
42 </param> 42 </param>
43 <param name="iters" type="integer" value="0" label="iters - Number of randomizations"/> 43 <param name="iters" type="integer" value="0" label="iters - Number of randomizations"/>
44 <param name="jumble" type="boolean" truevalue="" falsevalue="--jumble=false" checked="true" label="jumble"/> 44 <param name="jumble" type="boolean" truevalue="" falsevalue="--jumble=false" checked="true" label="jumble"/>
45 <param name="calc" type="select" label="calc - Calculators (Uses defaults if none selected)" multiple="true"> 45 <param name="calc" type="select" label="calc - Calculators (Uses defaults if none selected)" multiple="true">
46 <options from_file="mothur_calculators.loc"> 46 <option value="sharedobserved" selected="true">sharedobserved - the number of sequences in two samples</option>
47 <column name="mult2" index="2"/> 47 <option value="sharednseqs">sharednseqs - the number of sequences in two samples</option>
48 <column name="name" index="0"/>
49 <column name="value" index="0"/>
50 <filter type="static_value" name="mult2" column="2" value="rare" />
51 </options>
52 </param> 48 </param>
53 </inputs> 49 </inputs>
54 <outputs> 50 <outputs>
55 <data format="html" name="logfile" label="${tool.name} on ${on_string}: logfile" /> 51 <data format="html" name="logfile" label="${tool.name} on ${on_string}: logfile" />
56 <data format="tabular" name="rarefaction" label="${tool.name} on ${on_string}: shared.rarefaction" /> 52 <data format="tabular" name="rarefaction" label="${tool.name} on ${on_string}: shared.rarefaction" />