Mercurial > repos > jjohnson > mothur_toolsuite
comparison mothur/tools/mothur/tree.shared.xml @ 22:ed906f8149bb
Mothur - html escape amperand in calculator option label
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 19 Jan 2012 10:34:04 -0600 |
| parents | d86987601022 |
| children | bfbaf823be4c |
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| 21:97e35ab2887c | 22:ed906f8149bb |
|---|---|
| 1 <tool id="mothur_tree_shared" name="Tree.shared" version="1.20.0" force_history_refresh="True"> | 1 <tool id="mothur_tree_shared" name="Tree.shared" version="1.23.0" force_history_refresh="True"> |
| 2 <description>Generate a newick tree for dissimilarity among groups</description> | 2 <description>Generate a newick tree for dissimilarity among groups</description> |
| 3 <command interpreter="python"> | 3 <command interpreter="python"> |
| 4 mothur_wrapper.py | 4 mothur_wrapper.py |
| 5 --cmd='tree.shared' | 5 --cmd='tree.shared' |
| 6 #if $input.source == 'shared': | 6 #if $input.source == 'shared': |
| 93 <option value="braycurtis">braycurtis - Community Structure Similarity the Bray-Curtis similarity coefficient</option> | 93 <option value="braycurtis">braycurtis - Community Structure Similarity the Bray-Curtis similarity coefficient</option> |
| 94 <option value="jabund">jabund - Community Structure Similarity the abundance-based Jaccard similarity coefficient</option> | 94 <option value="jabund">jabund - Community Structure Similarity the abundance-based Jaccard similarity coefficient</option> |
| 95 <option value="morisitahorn">morisitahorn - Community Structure Similarity the Morisita-Horn similarity coefficient</option> | 95 <option value="morisitahorn">morisitahorn - Community Structure Similarity the Morisita-Horn similarity coefficient</option> |
| 96 <option value="sorabund">sorabund - Community Structure Similarity the abundance-based Sorenson similarity coefficient</option> | 96 <option value="sorabund">sorabund - Community Structure Similarity the abundance-based Sorenson similarity coefficient</option> |
| 97 <option value="thetan">thetan - Community Structure Similarity the Smith theta similarity coefficient</option> | 97 <option value="thetan">thetan - Community Structure Similarity the Smith theta similarity coefficient</option> |
| 98 <option value="thetayc" selected="true">thetayc - Community Structure Similarity the Yue & Clayton theta similarity coefficient</option> | 98 <option value="thetayc" selected="true">thetayc - Community Structure Similarity the Yue & Clayton theta similarity coefficient</option> |
| 99 <option value="canberra">canberra - Community Structure Similarity -</option> | 99 <option value="canberra">canberra - Community Structure Similarity -</option> |
| 100 <option value="gower">gower - Community Structure Similarity -</option> | 100 <option value="gower">gower - Community Structure Similarity -</option> |
| 101 <option value="hellinger">hellinger - Community Structure Similarity -</option> | 101 <option value="hellinger">hellinger - Community Structure Similarity -</option> |
| 102 <option value="manhattan">manhattan - Community Structure Similarity -</option> | 102 <option value="manhattan">manhattan - Community Structure Similarity -</option> |
| 103 <option value="odum">odum - Community Structure Similarity -</option> | 103 <option value="odum">odum - Community Structure Similarity -</option> |