Mercurial > repos > jjohnson > mothur_toolsuite
diff mothur/tools/mothur/fastq.info.xml @ 24:09740be2bc9c
Mothur - updates for Mothur version 1.24
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Wed, 28 Mar 2012 15:45:03 -0500 |
| parents | 4f797d3eee3a |
| children | 49058b1f8d3f |
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--- a/mothur/tools/mothur/fastq.info.xml Thu Jan 19 11:27:37 2012 -0600 +++ b/mothur/tools/mothur/fastq.info.xml Wed Mar 28 15:45:03 2012 -0500 @@ -1,4 +1,4 @@ -<tool id="mothur_fastq_info" name="Fastq.info" version="1.19.0"> +<tool id="mothur_fastq_info" name="Fastq.info" version="1.24.0"> <description>Convert fastq to fasta and quality</description> <command interpreter="python"> mothur_wrapper.py @@ -9,11 +9,17 @@ </command> <inputs> <param name="fastq" type="data" format="fastq" label="fastq - Fastq Sequence file"/> + <param name="fasta" type="boolean" truevalue="" falsevalue="--fasta=false" checked="true" label="fasta - Add fasta to your history" /> + <param name="qfile" type="boolean" truevalue="" falsevalue="--qfile=false" checked="true" label="qfile - Add qfile to your history" /> </inputs> <outputs> <data format="html" name="logfile" label="${tool.name} on ${on_string}: logfile" /> - <data format="fasta" name="out_fasta" label="${tool.name} on ${on_string}: fasta"/> - <data format="qual454" name="out_qfile" label="${tool.name} on ${on_string}: qual"/> + <data format="fasta" name="out_fasta" label="${tool.name} on ${on_string}: fasta"> + <filter>fasta == True</filter> + </data> + <data format="qual454" name="out_qfile" label="${tool.name} on ${on_string}: qual"> + <filter>qfile == True</filter> + </data> </outputs> <requirements> <requirement type="binary">mothur</requirement>