Mercurial > repos > jjohnson > mothur_toolsuite

diff mothur/tools/mothur/chop.seqs.xml @ 27:49058b1f8d3f

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Update to mothur version 1.27 and add tool_dependencies.xml to automatically install mothur
author Jim Johnson <jj@umn.edu>
date Tue, 04 Dec 2012 11:05:19 -0600
parents e990ac8a0f58
children 95d75b35e4d2
line wrap: on
line diff
--- a/mothur/tools/mothur/chop.seqs.xml	Wed May 16 13:12:05 2012 -0500
+++ b/mothur/tools/mothur/chop.seqs.xml	Tue Dec 04 11:05:19 2012 -0600
@@ -10,6 +10,7 @@
   --keep=$keep
   $countgaps
   $short
+  --processors=8
  </command>
  <inputs>
   <param name="fasta" type="data" format="fasta,align" label="fasta - Sequences to be chopped"/>
@@ -26,7 +27,7 @@
   <data format_source="fasta" name="out_fasta" label="${tool.name} on ${on_string}: chop.fasta" />
  </outputs>
  <requirements>
-  <requirement type="binary">mothur</requirement>
+  <requirement type="package" version="1.27">mothur</requirement>
  </requirements>
  <tests>
  </tests>