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view mothur/tool-data/mothur_aligndb.loc @ 8:3249eb52a9c1

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trim.seqs name parameter needs to be optional
author Jim Johnson <jj@umn.edu>
date Tue, 05 Jul 2011 13:07:40 -0500
parents 3202a38e44d9
children
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#This is a sample file distributed with Galaxy that enables tools
#to use a directory of metagenomics files.  
#file has this format (white space characters are TAB characters):
#
#<dbname>	<file_base>
#
greengenes	/project/db/galaxy/mothur/core_set_aligned.imputed.fasta
silva archaea	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.fasta
silva bacteria	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.fasta
silva eukarya	/project/db/galaxy/mothur/silva.eukarya.fasta
silva archaea nogap	/project/db/galaxy/mothur/Silva.archaea/nogap.archaea.fasta
silva bacteria nogap	/project/db/galaxy/mothur/silva.bacteria/nogap.bacteria.fasta
silva eukarya nogap	/project/db/galaxy/mothur/nogap.eukarya.fasta