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Change metagenomics datatypes to include labels and groups metadata. change Mothur tool configs to get label and group select options from a data_meta filter rather than using the options from_dataset attribute. This grealty decreases memory demand for the galaxy server.
author Jim Johnson <jj@umn.edu>
date Wed, 16 May 2012 12:28:44 -0500
parents 09740be2bc9c
children
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#This is a sample file distributed with Galaxy that enables tools
#to use a directory of metagenomics files.  
#file has this format (white space characters are TAB characters):
#
# lookup files from:   http://www.mothur.org/wiki/Lookup_files
#
#<name>	<file_base>
#
#GS20	/project/db/galaxy/mothur/lookup/LookUp_GS20.pat
#GSFLX	/project/db/galaxy/mothur/lookup/LookUp_GSFLX.pat
#Titanium	/project/db/galaxy/mothur/lookup/LookUp_Titanium.pat