Mercurial > repos > jjohnson > mothur_toolsuite
changeset 16:541e3c97c240
Mothur - fix set_meta for SffFlow in datatypes/metagenomics.py
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Fri, 09 Dec 2011 12:12:16 -0600 |
parents | a6189f58fedb |
children | 57df76d861e4 |
files | mothur/lib/galaxy/datatypes/metagenomics.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/mothur/lib/galaxy/datatypes/metagenomics.py Tue Nov 08 11:45:32 2011 -0600 +++ b/mothur/lib/galaxy/datatypes/metagenomics.py Fri Dec 09 12:12:16 2011 -0600 @@ -1005,7 +1005,7 @@ def set_meta( self, dataset, overwrite = True, skip = 1, max_data_lines = None, **kwd ): Tabular.set_meta(self, dataset, overwrite, 1, max_data_lines) try: - fh = open( filename ) + fh = open( dataset.file_name ) line = fh.readline() line = line.strip() flow_values = int(line)