Mercurial > repos > jjohnson > package_gmap_2013_05_09

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planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
author jjohnson
date Sun, 17 Jan 2016 13:56:05 -0500
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953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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1 <?xml version="1.0"?>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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2 <tool_dependency>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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3 <package name="gmap" version="2013-05-09">
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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4 <install version="1.0">
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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5 <actions>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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6 <action type="download_by_url" target_filename="gmap-2013-05-09.tar.gz">http://research-pub.gene.com/gmap/src/gmap-gsnap-2013-05-09.tar.gz</action>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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7 <action type="shell_command"> ./configure --prefix=$INSTALL_DIR --with-gmapdb=$INSTALL_DIR/gmapdb</action>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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8 <action type="shell_command">make</action>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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9 <action type="shell_command">make install</action>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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10 <action type="set_environment">
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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12 </action>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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13 </actions>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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14 </install>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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15 <readme>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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16 </readme>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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17 </package>
953f5eb53593 planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/packages/package_gmap_2013_05_09 commit fff24235f2fcb299330e34d04c03e1d931606f8d-dirty
jjohnson
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18 </tool_dependency>