Mercurial > repos > jjohnson > pileup_to_vcf

view test-data/test.pileup @ 0:3890f8ba0e4d

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author jjohnson
date Mon, 18 Feb 2013 11:32:50 -0500
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children bb0ac51f1b02
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seq1	272	T	24	,.$.....,,.,.,...,,,.,..^+.	<<<+;<<<<<<<<<<<=<;<;7<&
seq1	273	T	23	,.....,,.,.,...,,,.,..A	<<<;<<<<<<<<<3<=<<<;<<+
seq1	274	T	23	,.$....,,.,.,...,,,.,...	7<7;<;<<<<<<<<<=<;<;<<6
seq1	275	A	23	,$....,,.,.,...,,,.,...^l.	<+;9*<<<<<<<<<=<<:;<<<<
seq1	276	G	22	...T,,.,.,...,,,.,....	33;+<<7=7<<7<&<<1;<<6<
seq1	277	T	22	....,,.,.,.C.,,,.,..G.	+7<;<<<<<<<&<=<<:;<<&<
seq1	278	G	23	....,,.,.,...,,,.,....^k.	%38*<<;<7<<7<=<<<;<<<<<
seq1	279	C	23	A..T,,.,.,...,,,.,.....	;75&<<<<<<<<<=<<<9<<:<<
seq2	156	A	11	.$......+2AG.+2AG.+2AGGG	<975;:<<<<<
seq3	200	A	20	,,,,,..,.-4CACC.-4CACC....,.,,.^~.	==<<<<<<<<<<<::<;2<<
chr1	95935183	G	34	.,.,,,+1c,+1c.+1C,+1c,+1c.+1C.+1C.+1C,+1c.+1C,+1c,+1c.+1C,+1c,+1c.+1C,+1c.+1C.+1C,+1c,+1c,+1c.+1C.+1C.+1C.+1C.+1C^~c^~c	IFEGIHIBIIIBAGIDI@IHCIIGHIHHEIIG!!
chr1	158571283	A	8	<,.c.c^~t^~c	GIC#I#'!
chr6	125070485	C	216	<><<>>>>>>><<>>>><<<><<<<<>>>>><>>>>>><>>>>>>><><><>><><><>><>><<><<<>>>><<<>>>><<>>>><<<<<<<<<<<><<<<<<<><><<<<<><<<>><<<<<<<<>>>><<<<<<><><>>>>>>>>>>><<<<<<>><<<<>><><>>>>><>...,,,,,,,GGGGGGggggggGGGGggggggggg^~G^~g^~g^~g^~g	IHHH:GFDH<H@IHCEIIIIHIIIDI#EACGGIEHB#HDHEBHGGDI?BHIEIIIGHBHIEDIIHHHIGHFIIDI<IIIIEEIIIIGAHIHEGGIBHBIHE;@CFIBHGGCDBGDGGGIIDC@GEAGDIHIIEEHBIIGIEGHIHHIHHHH2@G#>EBHICD@#GHHHFI9HII#I##AIIIE5@G!!!!!!!!!#!!!!!!!!$$!!$!$!#!!!