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view test-data/IEDB.tsv @ 20:ab27c4bd14b9 draft

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author jjohnson
date Fri, 14 Jul 2017 11:39:27 -0400
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#ID	allele	seq_num	start	end	length	peptide	method	percentile_rank	ann_ic50	ann_rank	smm_ic50	smm_rank	comblib_sidney2008_score	comblib_sidney2008_rank	netmhcpan_ic50	netmhcpan_rank
PPAP2C	HLA-A*02:01	1	3	11	9	GMYCMVFLV	Consensus (ann/smm/comblib_sidney2008)	0.2	4	0.2	3.77	0.2	7.1e-06	0.5	-	-
PPAP2C	HLA-A*23:01	1	1	9	9	SFGMYCMVF	Consensus (ann/smm)	0.5	67	0.5	137.54	0.5	-	-	-	-
PPAP2C	HLA-A*23:01	1	4	12	9	MYCMVFLVK	Consensus (ann/smm)	0.65	146	0.7	160.11	0.6	-	-	-	-
PPAP2C	HLA-A*02:01	1	2	10	9	FGMYCMVFL	Consensus (ann/smm/comblib_sidney2008)	2.3	222	3.1	150.01	2.3	2.14e-05	1.3	-	-
PPAP2C	HLA-A*23:01	1	3	11	9	GMYCMVFLV	Consensus (ann/smm)	4.95	3256	4	2706.64	5.9	-	-	-	-
PPAP2C	HLA-A*23:01	1	2	10	9	FGMYCMVFL	Consensus (ann/smm)	6.55	4423	4.9	4144.10	8.2	-	-	-	-
PPAP2C	HLA-A*02:01	1	1	9	9	SFGMYCMVF	Consensus (ann/smm/comblib_sidney2008)	45	24390	45	44989.38	39	0.01	91	-	-
PPAP2C	HLA-A*02:01	1	4	12	9	MYCMVFLVK	Consensus (ann/smm/comblib_sidney2008)	54	23399	41	157801.09	54	0.01	86	-	-
ADAMTSL1	HLA-A*02:01	1	1	9	9	SLDMCISGL	Consensus (ann/smm/comblib_sidney2008)	1	26	1	51.65	0.9	3.02e-05	1.7	-	-
ADAMTSL1	HLA-A*23:01	1	4	12	9	MCISGLCQL	Consensus (ann/smm)	6.65	5781	5.9	3626.02	7.4	-	-	-	-
ADAMTSL1	HLA-A*02:01	1	4	12	9	MCISGLCQL	Consensus (ann/smm/comblib_sidney2008)	14	1823	6.5	2612.82	14	0.00056	24	-	-
ADAMTSL1	HLA-A*23:01	1	1	9	9	SLDMCISGL	Consensus (ann/smm)	30.5	27179	34	24684.82	27	-	-	-	-
ADAMTSL1	HLA-A*02:01	1	2	10	9	LDMCISGLC	Consensus (ann/smm/comblib_sidney2008)	42	23677	42	53716.78	41	0.01	71	-	-
ADAMTSL1	HLA-A*23:01	1	3	11	9	DMCISGLCQ	Consensus (ann/smm)	64.5	34451	73	118148.99	56	-	-	-	-
ADAMTSL1	HLA-A*23:01	1	2	10	9	LDMCISGLC	Consensus (ann/smm)	76.0	33222	62	665932.18	90	-	-	-	-
ADAMTSL1	HLA-A*02:01	1	3	11	9	DMCISGLCQ	Consensus (ann/smm/comblib_sidney2008)	97	31630	98	639896.89	71	0.03	97	-	-