Mercurial > repos > jjohnson > rsem
comparison rsem_calculate_expression.xml @ 3:59459de65740
mv RSEM datatypes to separate repository, remove samtools dependency
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Mon, 10 Mar 2014 07:19:56 -0500 |
| parents | 5949673f9e3e |
| children | 30a8343fb0e7 |
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| 2:5949673f9e3e | 3:59459de65740 |
|---|---|
| 1 <tool id="rsem_calculate_expression" name="RSEM calculate expression" version="1.1.17"> | 1 <tool id="rsem_calculate_expression" name="RSEM calculate expression" version="1.1.17"> |
| 2 <description>RNA-Seq by Expectation-Maximization</description> | 2 <description>RNA-Seq by Expectation-Maximization</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="1.1.17">rsem</requirement> | 4 <requirement type="package" version="1.1.17">rsem</requirement> |
| 5 <requirement type="package" version="0.1.19">samtools</requirement> | |
| 6 <requirement type="package" version="1.0.0">bowtie</requirement> | 5 <requirement type="package" version="1.0.0">bowtie</requirement> |
| 7 </requirements> | 6 </requirements> |
| 8 <command> | 7 <command> |
| 9 rsem-calculate-expression | 8 rsem-calculate-expression |
| 10 ## --tag string | 9 ## --tag string |