Mercurial > repos > jjohnson > shear
changeset 3:7506693aff3b default tip
Update to SHEAR version 0.2.11
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Mon, 14 Jul 2014 10:22:20 -0500 |
| parents | b84716da5595 |
| children | |
| files | shear_assemble.xml shear_sv.xml tool_dependencies.xml |
| diffstat | 3 files changed, 6 insertions(+), 6 deletions(-) [+] |
line wrap: on
line diff
--- a/shear_assemble.xml Sun Apr 27 19:57:03 2014 -0500 +++ b/shear_assemble.xml Mon Jul 14 10:22:20 2014 -0500 @@ -1,7 +1,7 @@ -<tool id="shear_assemble" name="SHEAR-Assemble" version="0.0.9"> +<tool id="shear_assemble" name="SHEAR-Assemble" version="0.0.11"> <description>create a personal genome from sdi</description> <requirements> - <requirement type="package" version="0.2.9">shear</requirement> + <requirement type="package" version="0.2.11">shear</requirement> </requirements> <!-- <version_command></version_command>
--- a/shear_sv.xml Sun Apr 27 19:57:03 2014 -0500 +++ b/shear_sv.xml Mon Jul 14 10:22:20 2014 -0500 @@ -1,8 +1,8 @@ <?xml version="1.0"?> -<tool id="shear_sv" name="SHEAR-SV" version="0.0.9"> +<tool id="shear_sv" name="SHEAR-SV" version="0.0.11"> <description>find SVs and estimate the heterogeneity levels from a BAM</description> <requirements> - <requirement type="package" version="0.2.9">shear</requirement> + <requirement type="package" version="0.2.11">shear</requirement> <requirement type="package" version="0.1.19">samtools</requirement> <requirement type="package" version="0.6.2">bwa</requirement> <requirement type="package" version="1.0.1">crest</requirement>
--- a/tool_dependencies.xml Sun Apr 27 19:57:03 2014 -0500 +++ b/tool_dependencies.xml Mon Jul 14 10:22:20 2014 -0500 @@ -19,8 +19,8 @@ Bioperl package Bio::DB:Sam </readme> </package> - <package name="shear" version="0.2.9"> - <repository changeset_revision="516ed9ae8174" name="package_shear_0_2_9" owner="jjohnson" toolshed="http://toolshed.g2.bx.psu.edu" /> + <package name="shear" version="0.2.11"> + <repository changeset_revision="a7d6848d1e58" name="package_shear_0_2_11" owner="jjohnson" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency>