annotate tool-data/snpeffect_regulationdb.loc.sample @ 9:937367efb1da
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Change tool dependency to package_snpeff_3_2, now uses environment variable: SNPEFF_JAR_PATH for the location of snpeff jar files.
| author |
Jim Johnson <jj@umn.edu> |
| date |
Wed, 18 Sep 2013 10:49:56 -0500 |
| parents |
13b6ad2ddace |
| children |
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| rev |
line source |
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1 ## Databases for SnpEff
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2 ## These are from the list on: http://snpeff.sourceforge.net/download.html
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3 ## the Description field in this sample is "Genome : Version"
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4 #Genome Regulation_Name
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5 GRCh37.70 CD4
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6 GRCh37.70 GM06990
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7 GRCh37.70 GM12878
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8 GRCh37.70 H1ESC
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9 GRCh37.70 HMEC
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10 GRCh37.70 HSMM
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11 GRCh37.70 HUVEC
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12 GRCh37.70 HeLa-S3
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13 GRCh37.70 HepG2
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14 GRCh37.70 IMR90
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15 GRCh37.70 K562
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16 GRCh37.70 K562b
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17 GRCh37.70 NH-A
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18 GRCh37.70 NHEK
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