comparison snpSift_annotate.xml @ 5:192a236898f5

Add test cases for SnpSift

4:fe23d90249ee

        </stdio>

	<outputs>
		<data format="vcf" name="output" />
	</outputs>

	<help>

This is typically used to annotate IDs from dbSnp.

For details about this tool, please go to http://snpeff.sourceforge.net/SnpSift.html#annotate

5:192a236898f5

        </stdio>

	<outputs>
		<data format="vcf" name="output" />
	</outputs>
	<tests>
	    <test>
                <param name="input" ftype="vcf" value="annotate_1.vcf"/>
                <param name="dbSnp" ftype="vcf" value="db_test_1.vcf"/>
                <output name="output">
                    <assert_contents>
                        <has_text text="rs76166080" />
                    </assert_contents>
                </output>
	    </test>
	</tests>
	<help>

This is typically used to annotate IDs from dbSnp.

For details about this tool, please go to http://snpeff.sourceforge.net/SnpSift.html#annotate